| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0571 |
|---|
| Symbol | rplJ |
|---|
| ID | 3905741 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 661056 |
|---|
| End bp | 661619 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637877904 |
|---|
| Product | 50S ribosomal protein L10 |
|---|
| Protein accession | YP_479684 |
|---|
| Protein GI | 86739284 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0244] Ribosomal protein L10 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAAG CTGAGAAGAC CGCCGCGGTG GCGGAGATCG TCGAGGAGTT CCGTGGCTCG
ACCGCTGCGG TGCTCACGGA GTACCGCGGT TTGACGGTGA GCCAGCTCAC CGAGCTGCGG
CGTGCCCTCG GCGAGGGCAC GCGCTACTCC GTGGTCAAGA ACACCCTGAC CAAGATTGCG
GCGGAGCAGG CCGGGGTCAC CGGACTCGAC GACCTGTTCG TCGGGCCGAC CGCCGTCGCC
TTCGTCAGCG GCGACCCGGT CGAGGCGGCC AAGGGCCTGC GCGACTTCGC TCGGGCGAAC
CCGGCACTGG TGCTCAAGGG CGGCTTCGTC GAGGGCAAGC CGATGACCGC CGACGAGATT
CGCAAGCTTG CGGATCTTGA GTCCCGCGAG GTCCTGCTGG CGAAGCTGGC CGGGGCGATG
AAGGGCACGC TGGCCGGGGC CGTCGGGCTC TTCGCCGCTC CGCTGTCCCA GGTGGCCCGG
CTCGCCGAGG CGCTGCGCGA GCAGCGCGAA GGCCAGTCCG CCGGCGTCGC CGAGCAGCCG
GCCGCCGAGG CTGCCGCCGA ATAG
|
|---|
| Protein sequence | MAKAEKTAAV AEIVEEFRGS TAAVLTEYRG LTVSQLTELR RALGEGTRYS VVKNTLTKIA
AEQAGVTGLD DLFVGPTAVA FVSGDPVEAA KGLRDFARAN PALVLKGGFV EGKPMTADEI
RKLADLESRE VLLAKLAGAM KGTLAGAVGL FAAPLSQVAR LAEALREQRE GQSAGVAEQP
AAEAAAE
|
|---|
| |