| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0570 |
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| Symbol | rplA |
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| ID | 3905740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 659890 |
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| End bp | 660669 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637877903 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_479683 |
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| Protein GI | 86739283 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTCCAC GTCGCCGCGT CCCTTCGACG GCCGTCCGCC ATCACCACGA GGAGACAGAC
AGTATGAAGC GCAGCAAGGC CTACCGTGCC GCGGCCGAGA AGATCAACCC GGAGAACTTC
TACAGCCCGC TGGAGGCGGT CCGCCTCGCG CAGCAGACCT CGACGACGAA GTACGACGCG
ACGGTCGAGG TTGCGATCCG GCTCGGGGTC GACCCTCGCA AGGCCGACCA GATGGTCCGT
GGCACGGTCA ACCTGCCGCA CGGCACCGGG AAGTCCCCCC GCGTCGCTGT CTTCGCAGCC
GGGGAGAAGG CCGCTGAGGC GAGCGCGGCC GGGGCCGACA TCGTCGGTAG CGATGACCTG
GTCGCCCGGA TCCAGGAGGG CTTCCTGGAG TTCGACGCGA CCGTCGCGAC GCCCGATCAG
ATGGCGAAGG TTGGTCGGAT CGCTCGGGTC CTGGGCCCCC GCGGCCTGAT GCCGAACCCT
AAGACCGGCA CCGTGACGCT GGACATCGGC AAGGCCGTCT CCGACATCAA GGGCGGAAAG
ATCAACTTTC GGGTGGACAA GCAGGGTAAC CTGCACATCG TCATCGGGAA GACGAACTTC
ACCGACACCC AGCTGATCGA GAACTACACG GTTGCCCTGG ATGAGATCGT CCGGGTGAAG
CCGTCCGCGG CCAAGGGCCG GTATCTGAAG AAGATCACCT TCACGACCAC CATGGGCCCG
GGTATCCCGG TCGACCCGAA CCGCACCCGC AACCTTCTCG ACGAGGGTGC CGCCGCCTGA
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| Protein sequence | MCPRRRVPST AVRHHHEETD SMKRSKAYRA AAEKINPENF YSPLEAVRLA QQTSTTKYDA
TVEVAIRLGV DPRKADQMVR GTVNLPHGTG KSPRVAVFAA GEKAAEASAA GADIVGSDDL
VARIQEGFLE FDATVATPDQ MAKVGRIARV LGPRGLMPNP KTGTVTLDIG KAVSDIKGGK
INFRVDKQGN LHIVIGKTNF TDTQLIENYT VALDEIVRVK PSAAKGRYLK KITFTTTMGP
GIPVDPNRTR NLLDEGAAA
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