Gene Francci3_0567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0567 
Symbol 
ID3905791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp658108 
End bp658356 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content65% 
IMG OID637877900 
ProductSecE subunit of protein translocation complex 
Protein accessionYP_479680 
Protein GI86739280 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0690] Preprotein translocase subunit SecE 
TIGRFAM ID[TIGR00964] preprotein translocase, SecE subunit, bacterial 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGACCG ATACCCGTGA CGCGGCACCG CGCCCCAAGC GGGCTACGCG TGCCGCGGGT 
CGACGTCGGT ATCGGCCACT TGTGTTCATC CGCGAGGTCA TGGCGGAGTT GCGGAAGGTC
GTCTACCCCG GGCGGAGTGA GCTGATCACC TATGTGCTGG TCGTGCTTGT CTTCGTCAGC
GTGATGACGG CGTTCGTGGC TACCCTCGAC TTCGGCCTCA CGAAGGCGGT CCTCGCGATC
TTCGGCTGA
 
Protein sequence
MATDTRDAAP RPKRATRAAG RRRYRPLVFI REVMAELRKV VYPGRSELIT YVLVVLVFVS 
VMTAFVATLD FGLTKAVLAI FG