Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0566 |
Symbol | |
ID | 3905789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 656454 |
End bp | 657662 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637877898 |
Product | aspartate aminotransferase |
Protein accession | YP_479679 |
Protein GI | 86739279 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGGCCA TGAGCAGGAT CTCGCACCGC ATCGGGGGAA TCGCCCCCTC CGCAACGCTC GCCGTCGACG CCACCGCCAA GGCGATGCGC GCCGCGGGCC GCGACGTGAT CGGGTTCGGC GCCGGGGAGC CGGACTTCCC AACCCCGGAC CACATCGTCG CCGCCGCCGA GAAGGCATGC CGTGAGCCCC GCATGCACCG CTACAGCCCG GCCGCGGGCC TGCCGGAGCT GAAGCAGGCC ATCGCCGAGA AGACCGCCCG AGACTCGGGG GTGATCGTCT CGCCGAGCCA GGTCCTGGTG ACCAACGGCG GCAAGCAGGC TGTCTACGCG GCGTTCGCGA CGCTGCTCGA CCCGGGGGAC GAGGTGCTCC TGCCCGCCCC GTACTGGACG ACCTACCCGG AGTCGATCCG GCTGGCCGGG GGTGTCCCGG TCGACGTCGT CACCGGTCCG GAAGCCGGGT ACCGGGTGAC GGTGGAACAA CTGGAGGCGG CACGCACCCC GCGGACCAAG GTTCTGCTGT TCAACTCCCC GTCGAACCCG ACCGGCGCCG TCCACACCCC CGAGGAGGTC CGCGCGATCG GACGGTGGGC CGAGCAGGCC GGGATCTGGG TCATCAGCGA CGAGATCTAC GAGCATCTGG TCTACGGCGA GACAAGGTTC GCCTCCGTTC TCGCCGAGGT ACCTGAGCTC GCCGAACGCT GCATCATCGT CAACGGGGTC GCGAAGACCT ACGCGATGAC GGGATGGCGG GTCGGTTGGC TGGTCGGGCC GGCGGACGCC GTAGCCGCCG CGACCAACCT CCAGTCCCAC GCGACGTCGA ACGTCTCGAA CGTCGCCCAG GCCGCCGCGC TTGCCGCGGT CGCCGGCCCG CTGGATGCGG TCGCCACGAT GCGCACCGCC TTCGACCGCC GCCGGCAGAC GATGCACCGC CTGCTGTCGC AGACGCCCGG GATCCGCTGC CCACTGCCCG ACGGGGCGTT CTACTGCTAT CCGTCGGTGC GGGACGTGCT CGGGCGCACC CTGCGCGGCC GTATCCCCAC CACGTCCGCG GATCTGTGCC AGCTGATCCT CGAGGAGGCT GGGGTCGCGA TCGTGCCGGG TGAGGCCTTC GGCACTCCCG GCTTCGCCCG GCTGTCCTAC GCGCTGAGCG ACGACGATCT CGTCAAGGGA GTCAGCCGCC TCTCCGCCCT GCTCGCCGAG GCGGCCTGA
|
Protein sequence | MAAMSRISHR IGGIAPSATL AVDATAKAMR AAGRDVIGFG AGEPDFPTPD HIVAAAEKAC REPRMHRYSP AAGLPELKQA IAEKTARDSG VIVSPSQVLV TNGGKQAVYA AFATLLDPGD EVLLPAPYWT TYPESIRLAG GVPVDVVTGP EAGYRVTVEQ LEAARTPRTK VLLFNSPSNP TGAVHTPEEV RAIGRWAEQA GIWVISDEIY EHLVYGETRF ASVLAEVPEL AERCIIVNGV AKTYAMTGWR VGWLVGPADA VAAATNLQSH ATSNVSNVAQ AAALAAVAGP LDAVATMRTA FDRRRQTMHR LLSQTPGIRC PLPDGAFYCY PSVRDVLGRT LRGRIPTTSA DLCQLILEEA GVAIVPGEAF GTPGFARLSY ALSDDDLVKG VSRLSALLAE AA
|
| |