Gene Francci3_0564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0564 
Symbol 
ID3905787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp655410 
End bp655871 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content66% 
IMG OID637877896 
Producthypothetical protein 
Protein accessionYP_479677 
Protein GI86739277 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTCA ATCAGGACTT CGTGGGACGA AGCTCGGTTT CCCCCGCCCC GTTCCAGGTC 
GGGCGCGAGC ACATCCGGAG GTTCGCCGAA GCGATCGGGG ACGACAACCC GCTGTACCAC
GATCTGGAGG CCGCGAAGGC CGCTGGTTAT CCCGATCTCG TGGCTCCACC CACGTTCCTC
ATCACAGTGA TCCCCGGAAC CCTCGGGGTG CCCACCGACG ATCCGGAGCT CGGCCTCGAC
TTCTCTCTGG TCGTCCACGG CGAGGAACGT TTCGTGTTGC TTCGGCCGGT GGTGGCCGGC
GACGAGCTGA TCTGCACCTC GACCCTGACC GGCATCCGGT CCGTGGGGAC CAACGAGGTG
CTCGTCGTCA ACTACCAGTT CGCCACGATC TACGGAGAGC AGGTCGCCAC CGGCGTGTGT
GGGCTGGTCT CGCGCGGGAC GGCTCCGCCG AGGCGCCAAT GA
 
Protein sequence
MPLNQDFVGR SSVSPAPFQV GREHIRRFAE AIGDDNPLYH DLEAAKAAGY PDLVAPPTFL 
ITVIPGTLGV PTDDPELGLD FSLVVHGEER FVLLRPVVAG DELICTSTLT GIRSVGTNEV
LVVNYQFATI YGEQVATGVC GLVSRGTAPP RRQ