Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0564 |
Symbol | |
ID | 3905787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 655410 |
End bp | 655871 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637877896 |
Product | hypothetical protein |
Protein accession | YP_479677 |
Protein GI | 86739277 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGCTCA ATCAGGACTT CGTGGGACGA AGCTCGGTTT CCCCCGCCCC GTTCCAGGTC GGGCGCGAGC ACATCCGGAG GTTCGCCGAA GCGATCGGGG ACGACAACCC GCTGTACCAC GATCTGGAGG CCGCGAAGGC CGCTGGTTAT CCCGATCTCG TGGCTCCACC CACGTTCCTC ATCACAGTGA TCCCCGGAAC CCTCGGGGTG CCCACCGACG ATCCGGAGCT CGGCCTCGAC TTCTCTCTGG TCGTCCACGG CGAGGAACGT TTCGTGTTGC TTCGGCCGGT GGTGGCCGGC GACGAGCTGA TCTGCACCTC GACCCTGACC GGCATCCGGT CCGTGGGGAC CAACGAGGTG CTCGTCGTCA ACTACCAGTT CGCCACGATC TACGGAGAGC AGGTCGCCAC CGGCGTGTGT GGGCTGGTCT CGCGCGGGAC GGCTCCGCCG AGGCGCCAAT GA
|
Protein sequence | MPLNQDFVGR SSVSPAPFQV GREHIRRFAE AIGDDNPLYH DLEAAKAAGY PDLVAPPTFL ITVIPGTLGV PTDDPELGLD FSLVVHGEER FVLLRPVVAG DELICTSTLT GIRSVGTNEV LVVNYQFATI YGEQVATGVC GLVSRGTAPP RRQ
|
| |