| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0562 |
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| Symbol | |
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| ID | 3905783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 652761 |
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| End bp | 654251 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637877892 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_479675 |
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| Protein GI | 86739275 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCCTA TGCACCGTTC CAGCCGGTAT CCGACGACAC GCGAGGTCCG GCCCGGTCCC
ACCGCCGGCG ACACCGTGCC TACGACCACC ACCCTGCCGA CCACCACCCC CACGTCTGGC
CACCCGGATG AAGAAGGCCA CGGCCCTCCT CCGGGGTCGA CGCGGCGGCG GGTCGACACC
CGCCCGTCCC TGCTGCCAAT CCCCCTCCCC CGGCGGGTGA CGAGCATCGC GGCGCTGGCC
ATCACCGCGG GGGCGTTGAC CGCGACCACC GGAGTCGCCC AGGGCGCGGT GCCGTCCCCG
ACCTGGCCAC GGGGGATCGA CGTGGCCTCC TGGCAGCATC CCGGCGGCGG CCCCATCGAC
TGGACCGCAG CGCGCGGCTC CGGCCTGAGC TTTGCGATCA TTAAGGCCAC CGAAGGACCG
AACTACACCA ATCCGTACTT TGCCGCGGAC CGGGACGCGG CCGCCAAAGC CGGTCTGGTG
GTCGGGGCCT ATCACTACGC GCGGCCGGCG CGGCCGATCT CGACCGCGGT GGACCAGGCA
CAGCGCTTCA TCACGGTGAG CGGGCTGACC CGCGCCGCCG GGCAGCTGGC CCCCGTGCTC
GACCTCGAGG ACGACGGAGG ACTCGATCCC GCCGCGCTGG CCGCCTGGAC GCGGGCGTTC
CTCGAGAAGA TCGAGACCGA GACCGGCCGG GCGCCCATCC TCTACACGTA CCGCTCGTTC
TGGACCAAGA AGCTGGCGGA CAACCACAGC TTCGCCCGGT ATCCGTTCTG GTTCGCCATC
TACAACAACA AGGCGACCCC GGGCTGGCTG CCCGGCGGCT GGACCAAGTG GGCGCTGTGG
CAGTACACCT CGAGTGGAAA TGTCCCGGGG ATCATGGGAA ATGTCGATCT GAACGTGCTG
TGCTGCACGC TGACCGCGCT CGCCGCACAG GCCGACGGCA CCCGCAGCGA GATCGAGAAG
TGGTACGCGA CCGCCGGGCT GACCCGCCTG GCCGTTGGGA CGCCCGTCGA CAGCGAACTG
CCCGCCGGCG GTGGCGGTCG CTGGCAGCGT TACTCCAACG GCCTGGCCTT CTGGTCCGTG
GCGACCGGCG TACAGGCCCT GCACGGATCC ATCGCGACGA AGTTCCTGGA GCTGGGCGGA
ACGAACAGCT TCCTGCGCCG GCCGGTGAGC GGTGTCGAGT ACGCCACGGC CCCGGAGACG
CTTCAGGCGA AGTTCCAGGG TGGCTGGATC TACTGGCACC CGGCCATCGG CGCGCACGAG
GTCCACGGCC GCATCCTGCG GACCTATCTG GGCCTCGGTG GCACGACGTC GAGCCTCGGG
CTTCCGATCA CCGACGAGTA CTCGGTCCCG GGCGGACGGG AGAGCACCTT TCAGTTCGGC
AAGCTCCGCT GGAGCGCGGC GACGAACGCG GTCACGACAC TGCCGGCCGG CAAGAACGGC
ACCGGCAAGA GTGGCGTGGG TGTGGCGGGT GGCGCCGGCA CCGCTCCCTG A
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| Protein sequence | MRPMHRSSRY PTTREVRPGP TAGDTVPTTT TLPTTTPTSG HPDEEGHGPP PGSTRRRVDT
RPSLLPIPLP RRVTSIAALA ITAGALTATT GVAQGAVPSP TWPRGIDVAS WQHPGGGPID
WTAARGSGLS FAIIKATEGP NYTNPYFAAD RDAAAKAGLV VGAYHYARPA RPISTAVDQA
QRFITVSGLT RAAGQLAPVL DLEDDGGLDP AALAAWTRAF LEKIETETGR APILYTYRSF
WTKKLADNHS FARYPFWFAI YNNKATPGWL PGGWTKWALW QYTSSGNVPG IMGNVDLNVL
CCTLTALAAQ ADGTRSEIEK WYATAGLTRL AVGTPVDSEL PAGGGGRWQR YSNGLAFWSV
ATGVQALHGS IATKFLELGG TNSFLRRPVS GVEYATAPET LQAKFQGGWI YWHPAIGAHE
VHGRILRTYL GLGGTTSSLG LPITDEYSVP GGRESTFQFG KLRWSAATNA VTTLPAGKNG
TGKSGVGVAG GAGTAP
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