Gene Francci3_0559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0559 
Symbol 
ID3905780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp650911 
End bp651447 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content70% 
IMG OID637877889 
Productorotate phosphoribosyltransferase 
Protein accessionYP_479672 
Protein GI86739272 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGACA ACGCGGCGCT GGCCGCCCAG GTTCGGACTG CTTCCCAGCT GACCGGGACA 
TTCCTGCTCC GGTCGGGCCG GACAAGCACC GAGTACTTCG ACAAGTACCT CTTCGAAGCC
GACCCGGCGC TGCTCGCTGC GGTGGTGGCC GGGCTCACCG AACTGGTGCC GCCCGGCGCG
GAGATCCTCG CCGGACTCGA ACTCGGCGGA GTGCCCCTCG TGACTCTGCT CTCCCAGCGC
ACCGGTCTGC CCGCCCGGTT CGTCCGGAAG AAGGCCAAAG AATACGGCAC CCGACGCATC
GCGGAGGGCG GCGACGTCAC CGGACGCCAC GTCGCCCTCG TCGAGGACGT GGTCACCTCC
GGTGGTGCCG TGCTCGACGC GACCCGGGTA CTGCGGGATG CCGGAGCGGT CGTGGAACAC
GTGCTCTGTG TGATCGACCG GCAGGAGGGC GGCCGGGAGA GACTCGCCGA GCTCGGTCTG
ACGTTGCATC CCGTCCTGAC CCGGGCGGAC CTGGAGGCCG CAGCCGCGGA CACCTGA
 
Protein sequence
MNDNAALAAQ VRTASQLTGT FLLRSGRTST EYFDKYLFEA DPALLAAVVA GLTELVPPGA 
EILAGLELGG VPLVTLLSQR TGLPARFVRK KAKEYGTRRI AEGGDVTGRH VALVEDVVTS
GGAVLDATRV LRDAGAVVEH VLCVIDRQEG GRERLAELGL TLHPVLTRAD LEAAAADT