Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0555 |
Symbol | |
ID | 3904206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 645389 |
End bp | 647275 |
Gene Length | 1887 bp |
Protein Length | 628 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637877884 |
Product | pyruvate flavodoxin/ferredoxin oxidoreductase-like |
Protein accession | YP_479668 |
Protein GI | 86739268 |
COG category | [C] Energy production and conversion |
COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.180519 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCAGAGC AGGTCAGGGA GAGGGAGACC CGCCGGCTCG ACCGGGTCGT CGTGCGCTTC GCGGGCGACT CCGGCGACGG TATGCAGCTC ACCGGAGAAC AGTTCACCAG CGAGACGGCA GCATTCGGCA ATGACCTGTC GACGCTTCCG GACTTCCCTG CCGAAATCCG CGCCCCAGCC GGCACGCCGG CCGGTGTGTC CGGCTTCCAG CTACATTTTT CCGATCACGA CATTCTCACC CCGGGTGACG CACCGGACGT ACTGGTTGCA ATGAACCCGG CGGCCCTGAA GGCGAATCTG AAGGATCTGC CGCCGGGGGC CAATCTCATT GTCAACACCG ATGCATTCAC CGGCGGCAAC CTCAAGAAAG CCGGCTATAC GACGGATCCG CTGACCGACG GCACGCTGGA TGCCTACACG GTGCATCGGG TGCCGCTCAC CTCGATGACC ATCAACGCGG TGCACGCCGC CGAGGGTGTC GGCGCCGGGG TCAACAAGAA GGAGGCCGAA CGAGCGAAGA ACATGTTCGC CCTGGGCCTC ATGAGCTGGC TGTACCACCG GCCGACCGAG AGCACCGTCG GCTTCCTGGA GAAGAAGTTC GCCAAACGGC CCGAGATCGC CGCGGCGAAC GTCGCGGCCT TCCGTGCCGG CTTCAACTAC GGCGAGACCA CCGAGTCCTT CTCGGTCACC TACGAGGTGG CGCCGGCCCG GATGAAGGCT GGTACCTACC GACGGATCAC CGGGAACACG GCATTGTCCT ACGGTCTGAT CGCCGCCGGC GAGCTGACCG GCCTGCCGGT GTTCCTCGGC TCCTACCCGA TCACCCCGGC CTCGGACATC CTGCACGAGC TGAGCCGGCA CAAGCGGTTC GGCGTGCGGA CCTTCCAGGC CGAGGATGAG ATCGCCGGCA TCGGCGCCGC GCTCGGTGCC TCCTTCGGCG GATCACTCGG CGTGACGACG ACCTCCGGCC CGGGTGTCGC GCTCAAAAGC GAGACCATCG GCCTCGCGGT CAGTCTCGAA CTGCCGCTCG TGATCGTCGA CATCCAGCGC GGCGGCCCGT CCACCGGCCT GCCCACCAAG ACCGAACAGG CCGATCTACT CCAGGCGATG TTCGGCCGCA ACGGCGAGGC TCCGGTTCCG ATCGTCGCGC CGCGCTCCCC GGCGGACTGC TTCAACGCCG CGATCGAGGC CGCCCGCCTG GCTACCAAGT ACCGCACGCC GGTGTTCCTG CTCTCCGACG GCTACCTGGC GAACGGCTCG GAGCCGTGGC TGCTGCCGAC CCGCTCGGAG CTGCCGGACC TGAGCGTCGC CTTCGCCACC GAGCCGAACC ACACCGGGCC GAAGGGGCCG GAGTTCTGGC CCTACCTGCG TGATCCGGAG ACCCTCGCCC GGCCGTGGGC AGTCCCCGGC ACGGCGGGCC TGGAGCACCG CATCGGCGGC ATCGAGAAGT CGGACGGCCA GGGTGCCATC TCCTACGATC CGGCCAACCA CGACCGGATG GTGCGGCTGC GCGCGGCGAA GATCGACGGT ATCGCGAACG ATGTCGCGCC ACTGGAGGTG GAGGACCCGT CCGGGCAGGC CCGGCTGCTC GTCCTCGGCT GGGGCTCCAC CTACGGCCCG ATCGCGGCCG GCTGCCGCCG GGTCCGCGCC AAGGGCATGC ACGTCGCTCA GGCACACCTG CGTCATCTCA ACCCCTTCCC CGCCAACACC GGGGACATCC TGCGGTCGTA TGACAAGGTG CTGATTCCCG AGATGAACCT CGGGCAGCTA AGGACCCTGA TCCGGGCCGA GTACCTCGTC GACGCGATCG GCTACAACCA GGTTCGCGGG CTGCCCTTCA AGGCCGCGGA GCTGGCGGGC GTCTTGGAGG ACGTGATCAA CCAGTGA
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Protein sequence | MSEQVRERET RRLDRVVVRF AGDSGDGMQL TGEQFTSETA AFGNDLSTLP DFPAEIRAPA GTPAGVSGFQ LHFSDHDILT PGDAPDVLVA MNPAALKANL KDLPPGANLI VNTDAFTGGN LKKAGYTTDP LTDGTLDAYT VHRVPLTSMT INAVHAAEGV GAGVNKKEAE RAKNMFALGL MSWLYHRPTE STVGFLEKKF AKRPEIAAAN VAAFRAGFNY GETTESFSVT YEVAPARMKA GTYRRITGNT ALSYGLIAAG ELTGLPVFLG SYPITPASDI LHELSRHKRF GVRTFQAEDE IAGIGAALGA SFGGSLGVTT TSGPGVALKS ETIGLAVSLE LPLVIVDIQR GGPSTGLPTK TEQADLLQAM FGRNGEAPVP IVAPRSPADC FNAAIEAARL ATKYRTPVFL LSDGYLANGS EPWLLPTRSE LPDLSVAFAT EPNHTGPKGP EFWPYLRDPE TLARPWAVPG TAGLEHRIGG IEKSDGQGAI SYDPANHDRM VRLRAAKIDG IANDVAPLEV EDPSGQARLL VLGWGSTYGP IAAGCRRVRA KGMHVAQAHL RHLNPFPANT GDILRSYDKV LIPEMNLGQL RTLIRAEYLV DAIGYNQVRG LPFKAAELAG VLEDVINQ
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