| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0549 |
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| Symbol | |
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| ID | 3904200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 636337 |
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| End bp | 638322 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637877878 |
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| Product | NADH dehydrogenase subunit L |
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| Protein accession | YP_479662 |
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| Protein GI | 86739262 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.322787 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCTG ACCCGCTTCT GCTCGCTGCC GCCGAACATG GCGGTAGCAA GATCCATTAT
GCGGCCGCGT CGGGGGTCTT CTCGCTGACC TGGCTGCTCA TCGCGCTTCC ATTGGCCGGA
GCCGCGGTGC TGTTGCTCGG CGGTCGGCGG ACCGACGGGT TCGGGCATCT GCTCGGCACA
CTGACCTCCG CCGCCAGCTT CGTGATCGGT CTGGTGCTGT TCGCCGGCCT GCTCGACCGC
CCCGGTGACG ACCGGGCGCT GTCCCAGCAG CTGTACTCCT GGATTCCGGT CAACGGTTTC
CGGGTGGACG TCGGTCTGCT GGTCGACCAG CTCTCGGTCG TCTTCGTGCT GCTGATCACC
GGGGTCGGGA CACTGATCCA CATCTACTCG ATCGGCTACA TGGCGCACGA CCCGGCCCGG
CGGAAGTTCT TCGCCTACAT GAACCTCTTC CTGGCGTCGA TGCTGCTGCT CGTCCTGGGC
GACAACTTCC TGTCGCTCTA TGCCGGCTGG GAGCTGGTCG GGCTGTCGTC CTTCCTGCTC
ATCAAGTTCT GGGAGTACAA GCCGGCCGCC GCCACCGCGG CGAACAAGGC CTTCTACATG
AACCGGGTCG GGGACGTCGG GCTGGCGCTC GCGATCATGT TCATGTTCGC CACCGTCGGG
TCGACGAGCT ACGCCGACGT GTTCGGCTCG GCCGCCGCGG GCGTCATCGG TTACGGCACG
ATCACCGCGA TCGCGCTGCT GCTCCTGCTC GCTGCGTGCG GCAAGTCCGG CCAGTTCCCG
TTGCAGGCCT GGCTGCCGGA CGCCATGGAG GGCCCGACCC CGATCTCCGC GCTCATCCAC
GCGGCGACCA TGGTCACCGC CGGGGTCTAT CTCATCGTGC GGGCCGGGCC GATCTTCAAC
GAGACGCAGG CCGCCCGTAC CGTCGTGGTG ATCATCGGGG CGGTCACGAT CCTGATCGGC
TGCGTCATCG GCTGTGCCTA CGATGACATC AAGAAGGTGC TGGCCTACTC GACAGTCAGC
CAGATCGGGT ACATGTTCCT CGCGGTGGGG CTGGGACCGG CCGGCTACGC GATCGGCATC
ATGCACCTGC TCGCCCACGG CTTCTTCAAG GCCGGTCTGT TCCTCGGATC CGGCTCGGTG
ATCCACGCGA TGAATGACGA CCAGGACCTG CGTCACTACG GCGGGCTCTG GCGGTATATG
AAGATCACCT GGGTGACCTT TGGTGTCGGC TACCTGGCGA TCATCGGGTT CCCCGGGTTC
TCCGGCTTCT TCACCAAGGA CCGGATCATC GAGACCGCCT TCGACAAGGG CGGGACGTCG
GGATACCTGC TCGGCTCGAT CGCGCTGCTG GGCGCGGGCA TCACCGCCTT CTACATGTCC
CGCCTGTTTC TGATGACCTT CCACGGCAGG CCGCGCTGGA CGACGGAGGG CGAGCACGCT
CGGCATCCGC ACGAGTCCCC GGGGTCGATG ACCGGTCCGA TGATCCTGCT GGCCGTCGGC
TCGCTCCTCG CCGGTGGCCT GTTCGTCCTC GGCCATTCGC TGCAGGACTG GCTCGAACCG
GTCGCCGGGG CGGGGGTCGA GGGTGTCCAC ACCTTCTCGC CGCTCGTCCT CACCCTGCTC
ACGCTGGTGG TCACCGCCGG CGGCTTTGCC GGGGCCTATG TGCGCTACCA GCTGCGCCCG
GTCGAGGCGA CGGCCCCGCC GGACTCCGAG GTCACCCTGG CCACCGTCGC CGCCCGTCAC
GACCTGTTCG CGAACACCTT CAACGAGACC GTCGCGATGC GGCCCGGCCA GTACCTGACC
CGTTTCCTGG TCTGGCTGGA CCTCGTCGGC GTTGACGGGC TCGTGCGGGG CAGCGCCGCC
GCCATCGGCG GCCTGTCGGG GCGGATGCGC CGCCTCCAGA CCGGCTTCGT CCGGTCCTAC
GCTCTGTCGA TGTTGGGAGG TGCCGTCCTC GTGGTCGGCG CGCTGCTGCT GGTGAGGGCG
GGCTGA
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| Protein sequence | MNADPLLLAA AEHGGSKIHY AAASGVFSLT WLLIALPLAG AAVLLLGGRR TDGFGHLLGT
LTSAASFVIG LVLFAGLLDR PGDDRALSQQ LYSWIPVNGF RVDVGLLVDQ LSVVFVLLIT
GVGTLIHIYS IGYMAHDPAR RKFFAYMNLF LASMLLLVLG DNFLSLYAGW ELVGLSSFLL
IKFWEYKPAA ATAANKAFYM NRVGDVGLAL AIMFMFATVG STSYADVFGS AAAGVIGYGT
ITAIALLLLL AACGKSGQFP LQAWLPDAME GPTPISALIH AATMVTAGVY LIVRAGPIFN
ETQAARTVVV IIGAVTILIG CVIGCAYDDI KKVLAYSTVS QIGYMFLAVG LGPAGYAIGI
MHLLAHGFFK AGLFLGSGSV IHAMNDDQDL RHYGGLWRYM KITWVTFGVG YLAIIGFPGF
SGFFTKDRII ETAFDKGGTS GYLLGSIALL GAGITAFYMS RLFLMTFHGR PRWTTEGEHA
RHPHESPGSM TGPMILLAVG SLLAGGLFVL GHSLQDWLEP VAGAGVEGVH TFSPLVLTLL
TLVVTAGGFA GAYVRYQLRP VEATAPPDSE VTLATVAARH DLFANTFNET VAMRPGQYLT
RFLVWLDLVG VDGLVRGSAA AIGGLSGRMR RLQTGFVRSY ALSMLGGAVL VVGALLLVRA
G
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