Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0543 |
Symbol | |
ID | 3904194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 629203 |
End bp | 630534 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637877872 |
Product | NADH-quinone oxidoreductase, F subunit |
Protein accession | YP_479656 |
Protein GI | 86739256 |
COG category | [C] Energy production and conversion |
COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.315884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.338133 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGTCA CCCCGGTCCT CACCCGGCGC TGGAACACGC CGGAGTCGTG GACGATCGAG ACCTACACCC GCCTCGACGG CTACACCGCG CTGCGCACCG CCTTCGCGAT GGCCCCGGAC GACCTCATCA AGCTGGTGAA GGACTCCGGG CTGCGGGGGC GCGGCGGCGC CGGCTTCCCC ACCGGGATGA AGTGGGGCTT CATCCCGCAG GGCGACGGCA GGCCGCACTA CCTCGTCATC AACGCCGACG AGGGGGAGCC GGGCACCTGC AAGGACGCGC CGCTGATGAT GGCGGACCCG CACTCGCTCA TCGAGGGGAT CATCATCGCG GCCTACGCGG TGCGGGCCGG CCGGGCGTTC GTCTACCTGC GCGGCGAACT GATCCACGCG GCCCGTCGGC TGCAGGCCGC CGTGGCCGAG GCCTACCGGG CCGGCTACCT CGGCCGGGAC ATCCTCGGCA GCGGCTTCGA CCTCGACCTC GTCGTGCACT CCGGCGCGGG CGCCTACATC TGCGGCGAGG AGACAGCCCT GCTCGACTCC CTGGAGGGCC GTCGCGGCCA GCCGCGGCTG CGCCCGCCGT TCCCCGCGAC GCACGGCCTG TACGCCTCCC CGACGGTGGT CAACAACGTC GAGACGATCG CGTCGGTGCC GTACATCGTG AACTACGGCG TGGACTGGTT CCGGTCAATG GGCCGGGAGC GCTCGCCGGG GCCGAAGATC TACAGCCTGT CCGGGCACGT GACCCGGCCC GGCCAGTACG AGGCCCCGAT GGGCACCACG CTGCGGGAGC TGCTCGACTT GGCCGGCGGC GTGCGGGGCG GTCACGGGCT CAAGGCGTGG ACCCCGGGCG GGTCGTCCAC TCCGATGCTG ACCGCCGAGC ACCTCGACGC GCCGCTCGAC TTCGAGGGCA TGCAGGAGGC CGGGTCGCTG CTTGGCACGG CCGCACTCAT GATCATGGAT GACACGGTCG ACATGCTCAA GGTCGTCCGC CGGCTCACCC AGTTCTACGC GCACGAGTCG TGCGGCAAGT GCACTCCGTG CCGCGAGGGC ACCACCTGGA TGGTGCAGAT CCTGTCCCGG ATGGAACGGG GCCAAGGCGA CGCCGAGGAC GTGGACACCC TCGTCGACGC CTGCGACAAC ATCTTCGGCC GGGCATTCTG CGCGCTGGCC GACGGGGCCA CCTCCCCGAT CGTCTCGGGG ATCAAGTACT TCCGGGACGA GTTCATCCCG GTGAGTGCGG TGACCACGAA GCCGAACCCC ACCCCGGGAG ACGCCACGGC CGGCGACGGC TCGCCCGCGT CCGCCCCGGG TGCCTACGCG GGAGCGCACT GA
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Protein sequence | MPVTPVLTRR WNTPESWTIE TYTRLDGYTA LRTAFAMAPD DLIKLVKDSG LRGRGGAGFP TGMKWGFIPQ GDGRPHYLVI NADEGEPGTC KDAPLMMADP HSLIEGIIIA AYAVRAGRAF VYLRGELIHA ARRLQAAVAE AYRAGYLGRD ILGSGFDLDL VVHSGAGAYI CGEETALLDS LEGRRGQPRL RPPFPATHGL YASPTVVNNV ETIASVPYIV NYGVDWFRSM GRERSPGPKI YSLSGHVTRP GQYEAPMGTT LRELLDLAGG VRGGHGLKAW TPGGSSTPML TAEHLDAPLD FEGMQEAGSL LGTAALMIMD DTVDMLKVVR RLTQFYAHES CGKCTPCREG TTWMVQILSR MERGQGDAED VDTLVDACDN IFGRAFCALA DGATSPIVSG IKYFRDEFIP VSAVTTKPNP TPGDATAGDG SPASAPGAYA GAH
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