| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0540 |
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| Symbol | |
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| ID | 3904191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 626165 |
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| End bp | 626875 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637877869 |
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| Product | NADH dehydrogenase subunit C |
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| Protein accession | YP_479653 |
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| Protein GI | 86739253 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
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| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.363465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.186456 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGACG AGAGCACAGC CTCCGCCGAC CTGATACCGG GCGCCGCCGG CGTGCCCGGC
GGTCCGGGTG GGCAGCGCCG GGACGCGTTC GGCGCCGGTG ACAGCGGTGA CACCTCCGGG
TTCGGCGGGC TCGTCACGCC CGTTCCGATC CTGAGCTCCA CCGCCCGCCC GTTCGGTGAC
GCCGACGCCG ACGCCGTCTA CGACGCGCTC GAACGTGCCT TCCCCCAGCT CGGCGACGCC
GTCGAACGGG TGGTGGTGGA CCGCGGGGAG CTGACCGTCC ACGTGCGCCG GGAGAGCCTC
GTCGCCGTCG GGCAAACCCT GCGCGACGAC CCCGACCTGC GGTTCGAGCT GCTGTCCTCG
CTGTCCGGCG TGGACTACCC GGACGACGTC ACCGGCCGTC GCCTGCACTC GGTGGCCCAC
CTGACCTCGA TGACGCACCG TCGCCGGGTC CGGGTCGAGG TGTCCGTCAC CGACGCCGAT
CCCACCGTGC CGAGCCTGAC CTCGGTGTGG CCCACCGCGG ACTGGCACGA GCGCGAGACC
TACGACATGT TCGGCATCGT CTACACGGGT CATCCGGGCC TGACCCGGAT CATGATGCCG
GACGACTGGA TCGGGCACCC GCAGCGCAAG GACTACCCGC TGGGGGGCAT CCCCGTCGAC
TACAAGGGTG CCACGATCCC GCCGCCAGAC GAGCGCCGGA GCTACTCGTG A
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| Protein sequence | MSDESTASAD LIPGAAGVPG GPGGQRRDAF GAGDSGDTSG FGGLVTPVPI LSSTARPFGD
ADADAVYDAL ERAFPQLGDA VERVVVDRGE LTVHVRRESL VAVGQTLRDD PDLRFELLSS
LSGVDYPDDV TGRRLHSVAH LTSMTHRRRV RVEVSVTDAD PTVPSLTSVW PTADWHERET
YDMFGIVYTG HPGLTRIMMP DDWIGHPQRK DYPLGGIPVD YKGATIPPPD ERRSYS
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