| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0539 |
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| Symbol | |
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| ID | 3904190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 625346 |
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| End bp | 626161 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637877868 |
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| Product | NADH dehydrogenase subunit B |
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| Protein accession | YP_479652 |
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| Protein GI | 86739252 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.573079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.187495 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACTAG AGGAGAAGCT GCCGGGCGGT GTGCTTCTCG CCAGCGTCGA GAAGCTCGCC
AACTGGTCAC GGCGCTCGTC GCTGTGGCCG GCGACCTTCG GGTTGGCCTG CTGCGCGATC
GAGATGATGT CGACGGGAGC CGGCCGCTAC GACCTGTCCC GATTCGGCAT GGAGGTCTTC
CGGGCCAGCC CGCGCCAGGC CGATCTCATG ATCGTTGCCG GCCGGGTGAG TCAGAAGATG
GCGCCGGTGC TGCGGCAGAT CTACGACCAG ATGCCCGAGC CCAAGTGGGT GCTGTCGATG
GGTGTCTGCG CCAGCAGCGG CGGCATGTTC AACAACTACG CGATCGTGCA GGGTGTGGAC
CACATCGTCC CGGTCGACAT GTACCTCCCC GGCTGCCCAC CGCGGCCGGA GATGCTCATG
GATGCCATCA TCAAGCTGCA CGAGAAGATC CTCGCCGGCC CGATCTCTGG CCGGATCGAG
CACACGAAGA TCGGCTCCTC GCCGTATCCG AAACCCATCG AGGTGGCCAC CGCCCGGGCC
GGTCTGCCGG AGGGCGCGTT CGACACCCGG ACCCTCTCGG TGAACGACCG CAAGCGCTTC
TCGATCCCGG CCGGGGCGCC GGCGCCGACG GGTGGCGGGG CGGTCGAACC CGCCCTGGAC
ACCCGCCGCC CCGCCGCCCT CGCGCCGCCG TCGGTGTTCG GGCGCGCCAA GCGGATACCG
GTCGACCCCA AGCCGAGTGA CGAGGCCCGG GCGCACGGGC CCGGTCCAAC CACCGAGAGC
ATCGGTGATG TCGACGGCCC GGATCGGGGG ATCTAG
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| Protein sequence | MGLEEKLPGG VLLASVEKLA NWSRRSSLWP ATFGLACCAI EMMSTGAGRY DLSRFGMEVF
RASPRQADLM IVAGRVSQKM APVLRQIYDQ MPEPKWVLSM GVCASSGGMF NNYAIVQGVD
HIVPVDMYLP GCPPRPEMLM DAIIKLHEKI LAGPISGRIE HTKIGSSPYP KPIEVATARA
GLPEGAFDTR TLSVNDRKRF SIPAGAPAPT GGGAVEPALD TRRPAALAPP SVFGRAKRIP
VDPKPSDEAR AHGPGPTTES IGDVDGPDRG I
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