Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0536 |
Symbol | |
ID | 3905447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 622279 |
End bp | 622998 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637877865 |
Product | carboxymethylenebutenolidase |
Protein accession | YP_479649 |
Protein GI | 86739249 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.192606 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCG CAGAGACCGT CGTCATCCCC ACCCCCGACG GGCCCGCCCC GGCCACGCTC ACCGAACCCG ATGGTCCCGC ACGCGGCGGC GTCGTCGTCC TCCACGAGGC GTTCGGCCTC ACCGAGCACA TCACCGATGT CTGCTCGAGG TTCGCGCGCG CGGGCTGGCG GGCCATCGCC CCCGACCTGT TCCACCGCGC GGGCTCGCCC GTCTTCGACT ACGACGACCT CGCCTCCGCG GTGAAGATCC TCGATGAGCT CAACGGCACC GACCTTCTCG CCGACATCGA CGCCGCGCTG GCCATCCTCG CCGAGGAGGG CACCGCCATC GACCGCTGCG CCGTCGTGGG CTTCTGCGTC GGCGGGAGCA TCGCCTTCCA GGCTGCGGTG GCCCGGCCGT TCGGCGCCGC GAGCACCTTC TACGGTGGCG GGATCACCAT GCGCCGCTTC GGGGAACCCG CCCAGCTGGA TCTCGCCGAC CGCCTGCAGG CACCGTGGCT CGGCCTGTAC GGCGACCAGG ATCCGAGCAT CCTCGCTTCG GAGGTGGAGG ACCTGCGGGC GGCGACACGG AAGGCGTCCG TGCCCGCCGA GATCGTCCGT TACCCACAGG CCGGGCACGG CTTCCACAAC GACGCCCGCG CCGGCGCCTA CCACGGCCCG TCGGCGAAGG ACGCCTGGTC ACGCATGCTG ACCTGGTTCG ACTCGCATGT TCCCGGCTGA
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Protein sequence | MTTAETVVIP TPDGPAPATL TEPDGPARGG VVVLHEAFGL TEHITDVCSR FARAGWRAIA PDLFHRAGSP VFDYDDLASA VKILDELNGT DLLADIDAAL AILAEEGTAI DRCAVVGFCV GGSIAFQAAV ARPFGAASTF YGGGITMRRF GEPAQLDLAD RLQAPWLGLY GDQDPSILAS EVEDLRAATR KASVPAEIVR YPQAGHGFHN DARAGAYHGP SAKDAWSRML TWFDSHVPG
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