| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0533 |
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| Symbol | |
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| ID | 3905444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 619171 |
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| End bp | 620358 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637877862 |
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| Product | hypothetical protein |
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| Protein accession | YP_479646 |
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| Protein GI | 86739246 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.271829 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.131592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGTCG ATGGTGAGAT TCCGGTGGGT CGGGGTGGTG GCGAGATCCG GTCTGTGCTG
GACCGGGCCG CAGCCGGCGG GCGTATCTCC GCGGAGGAGG CGCTGCTCCT CTATACGAGG
GCGCCGCTGC ACGCGCTCGG CGGCGCGGCG GACACGGTCC GTCGGCGCCG TTTCCCCGAT
GGCATCGCGA CGTACATCAT CGACCGGAAC ATCAACTACA CGAATGTCTG CGTGACCGCC
TGCCGGTTTT GCGCCTTCTA CCGCGCTCCG AAGCATGCCG AGGGCTGGGT CCGCGACGTC
GAGGACATCG TCGCCAAGTG CGGGGAGGCG GTCGAGCTCG GCGCCACGCA GATCATGCTG
CAGGGCGGGC ACCATCCCGA CTTCGGCATC GAGTGGTATG AGCGTACCTT TGCCGCCATC
AAGAAGGCAT ATCCCCAGTT GGCGCTGCAC TCGCTGGGCG CCAGCGAGGT TGTGCACATC
GCCCGGACGT CCGATCTGAC TTTTCCCGAG GTCATTACCC GGCTGCGGGA CGCGGGCCTG
GACAGCTTCG CGGGCGCGGG AGCGGAGATT CTCACCGAAC GGCCCCGGCA GGCGATCGCT
CCGCTGAAGG AGCCCGGTCA CGTCTGGCTG TCCGTGATGG AGACCGCCCA CAACCTCGGC
CTGGAATCCA CCGCCACCTT CATGATGGGC ACGGGGGAGA CGAACGCCGA GCGCATCGAA
CACCTGACGA TGATCCGGGA CGTCCAGGAC CGGACCGGCG GGTTCCGTTC GTTCATCCCC
TGGACCTACC AGCCGGAGAA CAATCATCTC GGCGGGCGCA CCCAGGCGAC GACCCTGGAG
TACCTCCGCC TCGTCGCGGT CGCGCGGCTG TTCTTCGACA ACATCACGCA CCTGCAGGGC
TCCTGGCTGA CCACCGGCAA GGAGATCGGC CAGCTCACCC TGCACATGGG CGCCGACGAC
CTCGGCTCGG TGATGCTGGA GGAGAACGTC GTCTCCTCCG CCGGGGCGCG CCACCGCACC
AACCGGTCGG AGCTGATCTC CCTGATCCGT GCTGCCGGCC GCATCCCCGC TCAGCGCGAC
ACCCGCTACC AGCACCTCGT CGTGCACCGC GACCCGGCGC AGGACCCGGT TGACGACCGG
GTGGCCTCGC ACTTCTCCTC CACCGCGCTA CCGCTCATCT CCGCGTAG
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| Protein sequence | MDVDGEIPVG RGGGEIRSVL DRAAAGGRIS AEEALLLYTR APLHALGGAA DTVRRRRFPD
GIATYIIDRN INYTNVCVTA CRFCAFYRAP KHAEGWVRDV EDIVAKCGEA VELGATQIML
QGGHHPDFGI EWYERTFAAI KKAYPQLALH SLGASEVVHI ARTSDLTFPE VITRLRDAGL
DSFAGAGAEI LTERPRQAIA PLKEPGHVWL SVMETAHNLG LESTATFMMG TGETNAERIE
HLTMIRDVQD RTGGFRSFIP WTYQPENNHL GGRTQATTLE YLRLVAVARL FFDNITHLQG
SWLTTGKEIG QLTLHMGADD LGSVMLEENV VSSAGARHRT NRSELISLIR AAGRIPAQRD
TRYQHLVVHR DPAQDPVDDR VASHFSSTAL PLISA
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