Gene Francci3_0529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0529 
Symbol 
ID3905440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp614615 
End bp615088 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content71% 
IMG OID637877858 
Productcobalamin (vitamin B12) biosynthesis CbiX protein 
Protein accessionYP_479642 
Protein GI86739242 
COG category[S] Function unknown 
COG ID[COG2138] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.584257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.194401 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGTC TACTGGTGAT CGGTCACGGA TCCCGGCGGG ACGAGGCGAA CGCGACGGTT 
CGGGAACTCG CCCACCGGCT CCTGGTCGAT CCCGGCCATG TGGTCGATCC CGGCCATGCC
GCCGCGCCAT GGACGTGGGG GGCGGTCGAA GCCGCCTTCC TTGAAATCGC CCAGCCCGAC
ATCGCCACCG GGTACGCCAC GCTGGCCGAC GCGGGATGCA CCGAAATCGT CGCCTACCCG
TTCTTCCTGT TCGACGGCAA CCACACCCGC CGGGACATCC CGGCGGCACT GGAGGGCGCC
CGGTGCCGGC ACCCGACGAC CCGATGGGTG CTGTCGGAGC CGCTCGGGCT GCACGCGAGC
GTCGTCGACG CGGTCCGCGC GCGACTCGAC GACACCCTGC GTCTCCTGGT CCGCGAAGCC
GATGCCGCCA CCCTGAAGAT CAACCCCCAG GCGAGCCGGT GGACCGGCTG GTGA
 
Protein sequence
MRGLLVIGHG SRRDEANATV RELAHRLLVD PGHVVDPGHA AAPWTWGAVE AAFLEIAQPD 
IATGYATLAD AGCTEIVAYP FFLFDGNHTR RDIPAALEGA RCRHPTTRWV LSEPLGLHAS
VVDAVRARLD DTLRLLVREA DAATLKINPQ ASRWTGW