| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0516 |
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| Symbol | ubiA |
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| ID | 3905174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 602790 |
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| End bp | 603749 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637877845 |
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| Product | prenyltransferase |
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| Protein accession | YP_479629 |
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| Protein GI | 86739229 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
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| TIGRFAM ID | [TIGR01475] putative 4-hydroxybenzoate polyprenyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.494925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGATCG CGGTGAGTGA CGCCGCGTGG GTGCCTGGCG CGTCGGAGCC GGTCGGGCGA
GGGTCGGGAG CCGGCCCGGG ACACGCCACC GGCCGGGTAC GGGCGTTTCT GCGGCTCGTC
GTCATCGAGC ACTCGGTCTT CGCGCTGCCG TTCGCCTACA TCGCGGCGCT CGCCGCCTCG
TTCGCGGATT CCCGGTCGGT GCACTGGTCG GACCTCGCCC TCGTCACCGT GGCGATGGTC
GCGGCCCGAA CTTTCGCCAT GGCCGCAAAC CGGGTCATCG ATCGCGCGAT CGACGCCCGT
AATCCGAGGA CGGCGAACCG AGAGCTGGTC ACCGGCGTGG TCTCGGTGCG TACGGCGGTC
GTCGGCGCCG CGGTCGCGCT CGCCGTCTTC CTCACCGCCG CCGCGGCCTT GTCCTGGCTC
TGCCTGCTGC TCGCGCCGGT CGCCGTCGCG CCGCTCGTCG TCTACCCCTA CGCGAAACGG
TTCACCGACT TCCCGCACGC CGTGCTCGGC ATCGCCCAGG CGGTGGCCCC GGTCGGCGCG
TGGATCGCGG TCACCGGTGA GTGGTCCTGG GCCGCACTGG TGCTCGGCCT TGCGGTCGGT
AGCTGGATCG GCGGCTTCGA CGTGATCTAC GCCTGCCAGG ATGCCGAGGT CGACCGGCGC
ATCGGCGTGC GTGCGGTGCC GGCCCGGTTC GGGGTGCGGG CCGCGCTCAT TGGTTCCACG
GTTACGCATA TGATCACCTT TGCGTTGTTC ATCGTCTACG GGCTGATGGA CAACGCCGGT
CCGTGGTGGT GGGCTGGGCT CGTGCTGACG GCGGCGGCAT TCTGCTATGA GCACGCCATC
GTGTCCCCGA ACGACCTGTC GCGGGTCAAC CGGGCCTTCC TCACCGCGAA CGGATTCGTC
GGCATCGTCT TGTTCCTCTT CGCCGTTGTC GATCTCGCCA GCCGTGGTCT GGCCGTCTGA
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| Protein sequence | MVIAVSDAAW VPGASEPVGR GSGAGPGHAT GRVRAFLRLV VIEHSVFALP FAYIAALAAS
FADSRSVHWS DLALVTVAMV AARTFAMAAN RVIDRAIDAR NPRTANRELV TGVVSVRTAV
VGAAVALAVF LTAAAALSWL CLLLAPVAVA PLVVYPYAKR FTDFPHAVLG IAQAVAPVGA
WIAVTGEWSW AALVLGLAVG SWIGGFDVIY ACQDAEVDRR IGVRAVPARF GVRAALIGST
VTHMITFALF IVYGLMDNAG PWWWAGLVLT AAAFCYEHAI VSPNDLSRVN RAFLTANGFV
GIVLFLFAVV DLASRGLAV
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