| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0513 |
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| Symbol | |
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| ID | 3905171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 599071 |
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| End bp | 600264 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637877842 |
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| Product | cytochrome c assembly protein |
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| Protein accession | YP_479626 |
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| Protein GI | 86739226 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.525112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.322787 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTCA ACGAGGGCGT AGCCAGCCTT TCCGATCATC TGTTTGGCAG CGGCGAGGCG
GTGTACGCCA CGGCGATGCT CGGCTACGCG GCCGAGTTCG CGTTCAGCCG GCTCGGCCTG
CGCCACGACG TGGCTCAGGA GGCGGCGGCC GTCCCGGCAC GGCAGGGGGC CGGGCTGCCG
GCAGCGCTGA TCGGGGCGGC GGCCGGCGGG ATCGGCGGCG CCGCCGATCC CGCCGAGGCG
GCCGGCCCGA CCGACGGGGC CGCGACCCCG ATCGACCCGT CCGACCCCGC CGCCGTGGCC
CTCGCTGCGG CCCGGGCCCG GGAGATCGAG GCTGTCCGGC GGCGGGCGAA CGCCGCGCAC
ACGCTGGCCG CCGGTAACGA CGGCGACGTG GCGGTTCCCG CGCGTGCCCG GTGGATCGGG
CGGATCGCCG TCGCGCTGAC GGTCGTCGGC TGGACGCTGC ACCTGGGGTC CGTCATCACT
CGTGGCCTCG CGGCGGACCG GGTGCCCTGG GGCAACATGT ACGAGTTCTC GTCGATGATC
TGCCTGATCG CGGTCACGAC GTTTCTCGCC CTGATGATCC GGCAGCCGGT CCGGTGGCTG
GGCGTCTTCG TCATGCTGCC GGTCGTGCTC TCGCTCGGTT TCGCCGGCAC TGTGCTCTAT
GTCGCAGCGG GACCGCTGGT GCCCGCGCTC AACTCGTACT GGCTCAAGAT CCATGTGGTC
GGTGCGATCG TCGCCAGCGG GGTGTTCCTG GTCTCCGCCG TGACCACGGT GTTGTTCCTC
GTCAAGGAGC GTTGGGAAAA TCGGCTGGCC GAGGTCGCGG CCGGACGGGC TGACGCGAGC
CAGGCCATGC AGCGCCGGGG CGGCATCGTC ATGCGCCTGC CGTCGTCGGC GGCGCTCGAC
ACCCTGTCCT ACCGGGTCAT CGCGTTCGCG TTCCCGATCT GGACCTTCGC GATCATTGCC
GGGGCGATCT GGGCGGAATC AGCATGGGGC CGCTACTGGG GGTGGGACCC CAAGGAGACG
TGGTCGTTCA TCACCTGGGT CTGCTACGCC GCCTACCTGC ACGCCCGCGC GACGGCCGGA
TGGCGTGGGC GGCGGGCCGC GGCGATCTCG CTGCTGGCCT TCAGCGCCCT GTTCGTGGAC
TACTACCTGG TGAATCTGGT CATCTCGGGG CTGCACTCCT ACGCCGGCAT CTGA
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| Protein sequence | MAVNEGVASL SDHLFGSGEA VYATAMLGYA AEFAFSRLGL RHDVAQEAAA VPARQGAGLP
AALIGAAAGG IGGAADPAEA AGPTDGAATP IDPSDPAAVA LAAARAREIE AVRRRANAAH
TLAAGNDGDV AVPARARWIG RIAVALTVVG WTLHLGSVIT RGLAADRVPW GNMYEFSSMI
CLIAVTTFLA LMIRQPVRWL GVFVMLPVVL SLGFAGTVLY VAAGPLVPAL NSYWLKIHVV
GAIVASGVFL VSAVTTVLFL VKERWENRLA EVAAGRADAS QAMQRRGGIV MRLPSSAALD
TLSYRVIAFA FPIWTFAIIA GAIWAESAWG RYWGWDPKET WSFITWVCYA AYLHARATAG
WRGRRAAAIS LLAFSALFVD YYLVNLVISG LHSYAGI
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