Gene Francci3_0508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0508 
Symbol 
ID3905166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp593524 
End bp594171 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content71% 
IMG OID637877837 
Productphosphoglycerate mutase 
Protein accessionYP_479621 
Protein GI86739221 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.409305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.66686 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAGC CGACTTCGTT GACCCGGGTG CATCTGGTCC GCCACGGCGA GGTCTTCAAC 
CCGGAGAAGA TCCTCTACGG CCGGCTGCCG GGGTTCCGGT TGTCCGACAA GGGCCAGCAG
CAGGCGAAGG TCACCGCCGA GTTCCTCGCG GAGCTGGACG TCGCGGCCGT GGTCGCGAGT
CCGCTGGATC GTGCCCAGCA GACCGCTGCG CCCATCGCCG CGGCGCACGC ACTCGCCGTC
CAGGTCGACC CGCGGCTGAT CGAAAGCCGC AACGCCTTCG AGGGCAGAAC GTTCGAGGCC
GGCCCGGCGG TGGTCCGGTA CCCCGCCCTG TGGCGCCTGC TACTCAATCC GTTCCGCCCA
TCCTGGGGCG AACCGTACGA CGAGATCGCC GCGCGGATGC TCGTGGCCGT CGTGGAATGG
CGCGACGCCC ACCCCGGTCG GCACGTCGTG CTCGTCAGCC ACCAGCTTCC GGTCTGGACG
GCTCGGCGTG CCCTGGAGAG AGTGCCCCTC TGGCACCGTC CCGACCGGCG GCAGTGCGGG
CTGGCGAGCG TCACCACGGC CGTCTACCGG GACTCCGAGC TCGTCGGCGT CGAGTACGCG
GAGCCGAACG GGCCGACCGC GAACACGCCT GGATCGGTCG GCGCCTGA
 
Protein sequence
MTEPTSLTRV HLVRHGEVFN PEKILYGRLP GFRLSDKGQQ QAKVTAEFLA ELDVAAVVAS 
PLDRAQQTAA PIAAAHALAV QVDPRLIESR NAFEGRTFEA GPAVVRYPAL WRLLLNPFRP
SWGEPYDEIA ARMLVAVVEW RDAHPGRHVV LVSHQLPVWT ARRALERVPL WHRPDRRQCG
LASVTTAVYR DSELVGVEYA EPNGPTANTP GSVGA