Gene Francci3_0502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0502 
Symbol 
ID3905160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp586114 
End bp586767 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content71% 
IMG OID637877832 
Productputative methyltransferase 
Protein accessionYP_479616 
Protein GI86739216 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.925229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGT CTGCCCCGAA CTATCTGACG ACCGTCGCGG CGGCGTATGA CGGCGTGGCC 
GAGGTGTATG CCGAGCTATT CGCCGACGTG CTCGACCGCC AGCCGCTGGA GCGTGCGCTG
CTGTCCGCGT TCGCCGACCT CACGCGCCCC CTGCCCGGCC CGGTCGCCGA CCTCGGCTGC
GGGCCCGGCT ATGCGACGGC CCACCTGCAC CGCTTGGGGC TGGACGTGTT CGGCGTGGAC
CTGTCACCGA AGATGATCGC TATCGCTCGA CGCTCACATC CACAGCTGCG TTTCGAGGTG
GGCACGATGA CCGCGCTGGA CCTGCCGGAC GGCATCCTCA GCGGCGCCCT GTGCCGCTAC
TCGCTCATCC ACACCCCGCC CGCCGACATC CCCGCCATCC TCGCCGAGAT CTACCGCCTC
CTTGCACCCG GCGGCCACCT GCTCCTCGGC TTTCTGGCCA CCGACGAGCC CGCGGCCGGG
GTGCACGCCT ATGACCACCG GGTCACCGGC GCGTACCGCT GGCCGCCCGA CCACCTCACC
GAGCTGGCAC GGCAGGCAGG ACTGGTCGAG GTCGCCCAGC TGGTACGAGC ACCGACGGAC
GAAGAACGAG GCCGACAGGC CCAGCTACTG GCCCGCCGCC CCCAGCAGAC GTAG
 
Protein sequence
MAESAPNYLT TVAAAYDGVA EVYAELFADV LDRQPLERAL LSAFADLTRP LPGPVADLGC 
GPGYATAHLH RLGLDVFGVD LSPKMIAIAR RSHPQLRFEV GTMTALDLPD GILSGALCRY
SLIHTPPADI PAILAEIYRL LAPGGHLLLG FLATDEPAAG VHAYDHRVTG AYRWPPDHLT
ELARQAGLVE VAQLVRAPTD EERGRQAQLL ARRPQQT