Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0478 |
Symbol | |
ID | 3903209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 559632 |
End bp | 560501 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637877809 |
Product | hypothetical protein |
Protein accession | YP_479593 |
Protein GI | 86739193 |
COG category | [S] Function unknown |
COG ID | [COG1912] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGGAT CGTGGATCAA TTTCCTGTCC GACTACGGCG TCGACGATGC CTCTGTAGGG GTGTGTCACG GGGTTATCGC GCGGCACGCC CCGTCGGCGC GCGTCCTCGA CGTCTGCCAC GCCATCGCGC CGCAGGACGT CGGGCATGCG GCCGTCACCC TGGTCGGCGC GATCGGTTAT CTTCCGATGG GGGTTCATCT CGTCGTCGTG GAGCGGCTCG ATGCCGACGG TTACACCCGC GGCGCGGCGA TCCGGAGCAC GGACGGCTCG ACCTTCGTCT GCCCGGACAA CGGCGTGGCG TCGCTGGCCT GGGATGCGCT CGGTGGCGTC GCCGCGGTGC ACGAGATCTC CAACCGGGAG CTGTGGCTGC CGCTGCCCAC CGCGGTGTTC CGGGGACGGG ACGTCTATGC GCCGGTCGCG GCCCGGCTTG CGGCCGGACT CGCCCTCACC GACGTCGGCC CCCGGCTCGA CCCCGACGCG CTCACGCGTT TCCAGCCGCG GGCGTGCAGC GTCGACGACG ACCATGTGCA CGGCGAGGTC GTGTCCGTCG ACCACTTCGG CAATCTCTCG CTCAACATGA CCCGGGCCGA GCTGGAGGCC GCCGGTATTC TGTTGGGAGA TCTGGTCGAG GTCCGCGCCG GCAACCGCGT CATGCGGCTC ACGTTCACGC ATACCTACGG CGATGCGCCC CGCGGTGGAG TCACCTTGTG TGAGGACGCG TTGCGTCGAA TGATGATCGC AGTAAATTGT GGGCGAGCGG CCGACCTGCT GCGGCTGCGG CGCCAGGACG CGGTCGTCGT GGCGCAGCTG CCGAGGAGCC CGTCACCGGG ACGCTCCATC CTGGATTTTC CGCTGCCGGC CCAGCGGTGA
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Protein sequence | MTGSWINFLS DYGVDDASVG VCHGVIARHA PSARVLDVCH AIAPQDVGHA AVTLVGAIGY LPMGVHLVVV ERLDADGYTR GAAIRSTDGS TFVCPDNGVA SLAWDALGGV AAVHEISNRE LWLPLPTAVF RGRDVYAPVA ARLAAGLALT DVGPRLDPDA LTRFQPRACS VDDDHVHGEV VSVDHFGNLS LNMTRAELEA AGILLGDLVE VRAGNRVMRL TFTHTYGDAP RGGVTLCEDA LRRMMIAVNC GRAADLLRLR RQDAVVVAQL PRSPSPGRSI LDFPLPAQR
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