Gene Francci3_0478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0478 
Symbol 
ID3903209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp559632 
End bp560501 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content69% 
IMG OID637877809 
Producthypothetical protein 
Protein accessionYP_479593 
Protein GI86739193 
COG category[S] Function unknown 
COG ID[COG1912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGAT CGTGGATCAA TTTCCTGTCC GACTACGGCG TCGACGATGC CTCTGTAGGG 
GTGTGTCACG GGGTTATCGC GCGGCACGCC CCGTCGGCGC GCGTCCTCGA CGTCTGCCAC
GCCATCGCGC CGCAGGACGT CGGGCATGCG GCCGTCACCC TGGTCGGCGC GATCGGTTAT
CTTCCGATGG GGGTTCATCT CGTCGTCGTG GAGCGGCTCG ATGCCGACGG TTACACCCGC
GGCGCGGCGA TCCGGAGCAC GGACGGCTCG ACCTTCGTCT GCCCGGACAA CGGCGTGGCG
TCGCTGGCCT GGGATGCGCT CGGTGGCGTC GCCGCGGTGC ACGAGATCTC CAACCGGGAG
CTGTGGCTGC CGCTGCCCAC CGCGGTGTTC CGGGGACGGG ACGTCTATGC GCCGGTCGCG
GCCCGGCTTG CGGCCGGACT CGCCCTCACC GACGTCGGCC CCCGGCTCGA CCCCGACGCG
CTCACGCGTT TCCAGCCGCG GGCGTGCAGC GTCGACGACG ACCATGTGCA CGGCGAGGTC
GTGTCCGTCG ACCACTTCGG CAATCTCTCG CTCAACATGA CCCGGGCCGA GCTGGAGGCC
GCCGGTATTC TGTTGGGAGA TCTGGTCGAG GTCCGCGCCG GCAACCGCGT CATGCGGCTC
ACGTTCACGC ATACCTACGG CGATGCGCCC CGCGGTGGAG TCACCTTGTG TGAGGACGCG
TTGCGTCGAA TGATGATCGC AGTAAATTGT GGGCGAGCGG CCGACCTGCT GCGGCTGCGG
CGCCAGGACG CGGTCGTCGT GGCGCAGCTG CCGAGGAGCC CGTCACCGGG ACGCTCCATC
CTGGATTTTC CGCTGCCGGC CCAGCGGTGA
 
Protein sequence
MTGSWINFLS DYGVDDASVG VCHGVIARHA PSARVLDVCH AIAPQDVGHA AVTLVGAIGY 
LPMGVHLVVV ERLDADGYTR GAAIRSTDGS TFVCPDNGVA SLAWDALGGV AAVHEISNRE
LWLPLPTAVF RGRDVYAPVA ARLAAGLALT DVGPRLDPDA LTRFQPRACS VDDDHVHGEV
VSVDHFGNLS LNMTRAELEA AGILLGDLVE VRAGNRVMRL TFTHTYGDAP RGGVTLCEDA
LRRMMIAVNC GRAADLLRLR RQDAVVVAQL PRSPSPGRSI LDFPLPAQR