Gene Francci3_0472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0472 
Symbol 
ID3903203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp552691 
End bp553626 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content72% 
IMG OID637877803 
ProductPpx/GppA phosphatase 
Protein accessionYP_479587 
Protein GI86739187 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.741402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTCG GTGTGATCGA CATCGGCTCG AACACCGTCC ACCTGCTTGT CGTGGACGCG 
CACCGGGGCG GCCAGCCGCA GCCGGCCGCC AGCGTGCGCG TGCCGTTGCG GCTGGTGGAA
CTGCTCGACG CGGACGGGGC GCTGGACGCC GCTGGAGAGC GCGCCCTGAC CTCCTGCGTC
CTGGACATGC GCCAGCAGGC CGACGCGCTC GGGGTCCACG ATCTGGCGGC CTTCGCCACG
TCGGCGTTGC GGGACGCCAC CAACGGAGAG GCGGTCCTGC GCCGGGTGGG CGAGGCCACC
GGGGTCTCCA TCGGCGTCCT GCCCGGGGAG GAGGAGGCCA GGTTGACCTT CCTCGCCGTC
CGCCGGTGGT TCGGCTGGAG CGCCGGCCGG TTGCTGGCGT TGGACATCGG CGGTGGTTCC
CTGGAGATCG GCGCCGGCAT GCACGAGGAC CCCGAGGTGG TCGCATCCCT GCCGCTTGGC
GCGAGCCGGC TGACCCGGGA CTGGCTGGCC CCGAGCGACC CGCCCAAGCG GTCCGAGCTC
AGCGAGCTGC GCCGTTACGT CCGGTCCCAG ATCGCGCCGA TCGTGGGCAC CATCTATCCC
CTGGGGGAGC ACACGAGGGC GGTGGCGACG TCGAAGACCT TCCGGTCGCT GGCTCGGATC
GCCGGTGCGG AGTCCTACAG CCGCGGTCCC TATACCCGCA GGGTGCTGCG CCGGGACGAC
CTCGTGGAGG TGACGGCCAA GGTGTGCCGG ATGTCGGTCG AGGAGCGCGC GGCGCTGCCG
GGCGTCTCCG CCTCCCGGGC GGCCCAGTTG GTCGCGGGGG CGGTCGTCGC GGACGAGGCT
CTCGATCTGT TCGCCATCGA CGAGGTGGAG ATTTGCCCCT GGGCCCTGCG CGAAGGGGTG
ATCCTGCGCC GCCTGGACTG GCTCACCTCA TCCTGA
 
Protein sequence
MRLGVIDIGS NTVHLLVVDA HRGGQPQPAA SVRVPLRLVE LLDADGALDA AGERALTSCV 
LDMRQQADAL GVHDLAAFAT SALRDATNGE AVLRRVGEAT GVSIGVLPGE EEARLTFLAV
RRWFGWSAGR LLALDIGGGS LEIGAGMHED PEVVASLPLG ASRLTRDWLA PSDPPKRSEL
SELRRYVRSQ IAPIVGTIYP LGEHTRAVAT SKTFRSLARI AGAESYSRGP YTRRVLRRDD
LVEVTAKVCR MSVEERAALP GVSASRAAQL VAGAVVADEA LDLFAIDEVE ICPWALREGV
ILRRLDWLTS S