Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0470 |
Symbol | |
ID | 3903201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 550454 |
End bp | 551731 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637877801 |
Product | histidine kinase |
Protein accession | YP_479585 |
Protein GI | 86739185 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.53157 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCGG TGCCTGGAAC AGCCGGTTCG ACGACTGACC TGACTACTGG TTCGGCGTCC GGCGGGGACA CCGGCGGCAT GACCTTGCCG GCAAGGCTCG TGCGTCGGGT GATCGCCGGC CTGCCGACCG GTCTGCTCGT CCTCGACGCC GCGGACCGGG TGGTCCTGGT GAACATGGTC GCGCGACGTA TGGGTGTGGT CGCCGCCGAC GAGATCGCGG TGGCGGAGCT GGCCGATCTC GTCCGGGCCA CCCGGCTCGC GGGCAGTGAC CAGGAGCGGC AGCTTGAGCT GCCGCCCGTC CCCGAGCCCC CCCTCACCCG TCCCCGACCG GACCAGGAGG GGCTGGCGGT GCGTGCCCGG GCCCGGCTGC TGGACTCGTC CGGTCATGTC GCCGTCATCG TGGATGACAT TACCGAGTCG CGTCGGGTCG AGGCCGTCCG TCGGGACTTC GTGGCGAACA TCAGCCACGA GCTCAAGACG CCGGTCGGTG CGTTGCACGT CCTCGCCGAA GCGGTCGCCG CGGCCTGCGA GGACCCGGTG GCAGTCCGCC GGTTCGCCTC CCGGATGACC CACGAATCGA CCCGGCTCGC CCGTCTTGTT CAGGAGATCA TCGATCTCTC CCGGCTGCAG GGCGCCGATC CGCTGCCCAA CCTGCGGCCG ATGCGGGCGT CCGCGGTGCT CACCGAGGCG GTCGACCGCA CCCGGCTGGC AGCGCAGGCC CAGGCGATCT CGGTTGCGGT GATCGGCGAC GGTGACCTGC CGGTGTGTGG GGATGAGGGC CAGCTCGTGA CCGCCGTCGC GAACCTGCTC GACAATGCGA TCAGCTACTC GCCGCGTGGC ACCCGGGTTG TGCTCGGGGT TCGGCGCAGC GGTGAGACCG TGGAGATCTC CGTCGCCGAC GAGGGCATCG GGATCGCGGA GAAGGACCTG GAACGGGTCT TCGAACGCTT CTATCGGGCG GATCCGGCGC GATCCCGCGC GACCGGTGGG ACCGGCCTGG GGCTCGCCAT CGTCAAGCAC ATCGCGACCA ATCACGGCGG CGTGGTCTCT GTGTGGAGCG CCGAGGGCGC GGGTTCCACC TTCACGCTCC GGTTGCCGCT GTTCACCGGC GACGATGACG ATGCGATGAC GGACGGCTCG GACGAAACCC GCGAGGATGA CGGGGTGGAT GGCTTCGACG TCGTCGGGGC CGATGCCGAC GCCCGCGGTC GGGGCGATGG TGAACATCAT GGCGATGGTG AACATCATGG CGATGATGAA CTCGGTGGCG GTTCGTGA
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Protein sequence | MTAVPGTAGS TTDLTTGSAS GGDTGGMTLP ARLVRRVIAG LPTGLLVLDA ADRVVLVNMV ARRMGVVAAD EIAVAELADL VRATRLAGSD QERQLELPPV PEPPLTRPRP DQEGLAVRAR ARLLDSSGHV AVIVDDITES RRVEAVRRDF VANISHELKT PVGALHVLAE AVAAACEDPV AVRRFASRMT HESTRLARLV QEIIDLSRLQ GADPLPNLRP MRASAVLTEA VDRTRLAAQA QAISVAVIGD GDLPVCGDEG QLVTAVANLL DNAISYSPRG TRVVLGVRRS GETVEISVAD EGIGIAEKDL ERVFERFYRA DPARSRATGG TGLGLAIVKH IATNHGGVVS VWSAEGAGST FTLRLPLFTG DDDDAMTDGS DETREDDGVD GFDVVGADAD ARGRGDGEHH GDGEHHGDDE LGGGS
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