Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0469 |
Symbol | |
ID | 3903200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 549477 |
End bp | 550124 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637877800 |
Product | phosphate uptake regulator, PhoU |
Protein accession | YP_479584 |
Protein GI | 86739184 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0704] Phosphate uptake regulator |
TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.741402 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGGACG CCTTCACCGA CGAACTCGAC AGCATCAACC GGTCCCTGAT CGAGATGACC AACCTGGTCG CCTCGGCCAT GGCCCGGGCC ACCACCGCTC TCCTCGACGC CGATCTCCAA CTCGCCGAGA ACGTCATCAG CGGAGACGAG ACGGTCGACC TGCTGCGCAA CGAGATCGAG GAGCGGGCCT TCGACGTGAT GGCCCGCCAG GCCCCGGTCG CCACCGATCT GAGGATGATG GTGGCCACGC TGCGGATCGT CGCCGACCTG GAGCGGATGG GCGACCTCGC CCTGCACGTG GCGAAGGTCG CCCGCCGGCG CTACCCGGGC CGGGCGGTCC CGCCGGAGCT CCGGGCGACC CTGCTGGAGA TGGGGCAGGT CGCGCAGCGC ATCGTCGCGA AGGCCGGATC GGTGATCGCC AGCCGGGACA CCGACCTCGC CAAGCAGCTG GAGGCCGACG ACGACGCGAT GGACGGGCTG CACCGCGCCC TGTTCCACAT ACTGATCGAG AAGCCCTGGC CGCACGGGAT GGAGGCGGCG ATCGACATCA CTCTCTGCGG CCGCTACTAC GAGCGGTACG CCGACCATGC GGTCTCGGTC GCCCGCCGGG TGCTCTACCT GGTCACCGGG GATTCCAGCG GCGCGTGA
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Protein sequence | MRDAFTDELD SINRSLIEMT NLVASAMARA TTALLDADLQ LAENVISGDE TVDLLRNEIE ERAFDVMARQ APVATDLRMM VATLRIVADL ERMGDLALHV AKVARRRYPG RAVPPELRAT LLEMGQVAQR IVAKAGSVIA SRDTDLAKQL EADDDAMDGL HRALFHILIE KPWPHGMEAA IDITLCGRYY ERYADHAVSV ARRVLYLVTG DSSGA
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