| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0422 |
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| Symbol | |
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| ID | 3903246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 501708 |
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| End bp | 502997 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637877753 |
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| Product | ammonium transporter |
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| Protein accession | YP_479538 |
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| Protein GI | 86739138 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAAT TGAATTCGGG CGATACCGCG TGGATGCTCA TCAGTTCCGC GATCGTGCTG
TTCATGACGC CCGGACTGGC GTTCTTCTAC GGTGGCATGG TCCGAGCGAA GAACGTGCTC
GGAATGATCA TGCAGAACTT CTTCTGCATC GGGATCGTCA CGCTGATCTG GTCGGTCATC
GGGTTCAGCG TCGCGTTCGG CGAGGGTAAC GGCTTCTGGG GCGGATTCGA CTTCTTCGCT
CTCCAGGACC TCTCCGGCAG CGACGGCGCG ATCCCGTACG TCGTGTTCGT CGCCTTCCAG
CTGATGTTCG CGATCATCAC GCCCGCCCTC ATCACCGGCG CGATCGCCGA TCGCATGAAG
TTCAGCGCCT TCGCGATCTT CATCCCGCTC TGGTCGCTGC TGGTCTACTC GCCGATCGCA
CACTGGGTGT GGGCGAGCAA GGGCTGGTTG TTCGAGCGCG GCGCGATGGA CTTCGCGGGC
GGCACGGTCG TCCACGCCAA CGCCGGTATC GCGGCGATCG TGCTGGCGCT GGTCCTCGGC
AAGCGGGCCG GTTGGCCGAC CGGCGACTTC CGCCCCCACA ACGTCCCGTT CGTTCTCCTG
GGCACCGGCA TCCTGTGGGT CGGATGGTTC GGGTTCAACG CGGGTTCCGC GCTGGGCGCC
AACAAGGTCG CCGGATACGC CCTGCTCAAC ACCCAGATCG CGACCGGCGT CGCGATCCTC
GGATGGCTCG CGGTCGAGCA GCTGCGCGAC GGCAAGGCGA CCACCCTGGG AGCCGCCTCC
GGCGCGGTCG CGGGTCTGGT GGCCATCACC CCGGCCTGTG GTTTCGTCTC TCCGATGGGT
TCGATCGCCA TCGGCGGCAT CGCCGGCGTC GTCTGCGCCC TGGCCACCTC GATCAAGGGC
AAGGTCGGCA TCGACGACTC GCTCGACGTC GGTGCGGTCC ACCTGGTCGG CGGTGTGCTC
GGAGCCCTGC TGACCGGCCT CTTCGCCACC GTCGACACGA ACGAGGCCGG CAAGGACGGT
GTCTTCTACG GCGGCCCGTG GAGCGTCTTC GGGGAACAGG CGCTCGCCGT CGGCGCGACG
CTGGGCTACT CGGCCGTCGT GACGGCGATC ATCGCTCTCG CCCTGAAGTA CACCATCGGT
CTCCGGCTGA ACGCCGACGA CGAGATCGCC GGCATGGACG AGGCGTTGCA CGGGGAGACG
GCGTACCGCT TCACGTCCAT CGGCGGTAGC GGCTCGCTGT CCACGAGCAG CATCAGCCCC
GTCAAGGTGC CCGAGGAGGC CCAGGCATGA
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| Protein sequence | MDKLNSGDTA WMLISSAIVL FMTPGLAFFY GGMVRAKNVL GMIMQNFFCI GIVTLIWSVI
GFSVAFGEGN GFWGGFDFFA LQDLSGSDGA IPYVVFVAFQ LMFAIITPAL ITGAIADRMK
FSAFAIFIPL WSLLVYSPIA HWVWASKGWL FERGAMDFAG GTVVHANAGI AAIVLALVLG
KRAGWPTGDF RPHNVPFVLL GTGILWVGWF GFNAGSALGA NKVAGYALLN TQIATGVAIL
GWLAVEQLRD GKATTLGAAS GAVAGLVAIT PACGFVSPMG SIAIGGIAGV VCALATSIKG
KVGIDDSLDV GAVHLVGGVL GALLTGLFAT VDTNEAGKDG VFYGGPWSVF GEQALAVGAT
LGYSAVVTAI IALALKYTIG LRLNADDEIA GMDEALHGET AYRFTSIGGS GSLSTSSISP
VKVPEEAQA
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