Gene Francci3_0419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0419 
Symbol 
ID3903242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand- 
Start bp497761 
End bp498318 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content69% 
IMG OID637877749 
Productintegrase 
Protein accessionYP_479535 
Protein GI86739135 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.68554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.436599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGCCCC GGGTCGAAGG TCGTGAAAGC GGATCGGGGG AAGGGGCATC GCCGCGGCGT 
CTGTACTGCT TCTTCGCCAT CGAGGTCGGC TCCCGCTCCG TCCACATCCT CGGGGTCACC 
GCCCACCCCG ACGGACCGTG GAGCACCCAA CAAGCCCGGA ACCTCCTCCT GGACCTCGGT 
GACCGGGCGG CCGACTTCCG GTTCCCGGTC CGTGACCGCG CCGGACAGTT CACCGCGTCG 
TTCGACGCGC TCCTCGCCGA CGCCGGCATC ACCGCGATCA GGATCCCACC CCGGACCCCG 
CGGGCGAACG CCTACGCGGA ACGGTTAGTC CGAACCGTCC GGACCGAGGT CACCGACCGG 
ATGCTGATCT TCGGTGAACG GCACCTGCGC GTTGTCCTGG CCGAGTACGC ACGGCGCTAC 
AACGGACGAC GCCCCCACCG CGGCCGCGAC CTTCAACGAC CACGGCCCGA CCACCCCGCC 
GCGGACCTGA GCCAGGAACG GATCAAACGT CAGCCCGTCC TCGGCGGCCT GATCAACGAA 
TACGAACGAG CCGCCTAA
 
Protein sequence
MPPRVEGRES GSGEGASPRR LYCFFAIEVG SRSVHILGVT AHPDGPWSTQ QARNLLLDLG 
DRAADFRFPV RDRAGQFTAS FDALLADAGI TAIRIPPRTP RANAYAERLV RTVRTEVTDR 
MLIFGERHLR VVLAEYARRY NGRRPHRGRD LQRPRPDHPA ADLSQERIKR QPVLGGLINE 
YERAA