| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0407 |
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| Symbol | |
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| ID | 3903649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 477885 |
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| End bp | 479396 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637877736 |
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| Product | phage integrase |
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| Protein accession | YP_479523 |
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| Protein GI | 86739123 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4973] Site-specific recombinase XerC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.995866 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGAC GGCAACCCCC TGGACGTGGC CTGATGGCCG AGGGTAAGGG CAGCAGACGC
GGCAACGGCG AAGGCTCGAT CTACCGGTAC CGCAACGGTT GGGCCGGTCA GATCAGTATG
CCGGACGGCA CCCGGCCGAC GTTCTACGGC AAGACGAAGG ACGACGTCCG AGGGAAGATC
ATTGCCGCGC TCCGGGCGGT GCAGGACGGG GTGCCGCTGG TCACGACACG GATGACGGTG
GCCGAATATC TCGATCAGTG GGTGACCATC GTTCTGCCTT CCCGCGTGGT CGCCGGAACG
CTCGCCGAGT CAACGGCCGA GTCGTATGCC GATCAGGTCC GGCTGCATAT CACGCCGATC
CTCGGCCGTC ACGAGCTGCG CAAGCTGTCC ACCGCGCACG TCCGCCACTG GATGACGCGC
AAGCTCACGG AACCGTCGTC CGCGGGTCTG GCGCAGTGCG CGGCCTGGGA GGCTGAGGCG
GCCCGCAAGG CGGCAGAACG CGCGAAAGAG AAGAAGACTC GCCCGGCTCG ACGCGCGACA
GCACAGAAGA AGGCTCCGGC ACCGAGCGAA CGCAAGCCCG TCAAGCCGCT GTCGGCCCGG
TCGGTGCGCT ACCTGCTGGT GATCCTCACC GCGGCGTTGA ATGACGCGGT CCGGGAGGAA
CTGCTGACCC GGAACGTCGC CGCTCTCGTC CAGCCGCCGA GGAAGGCCGA TGCGCCGATA
CGGGCGCTCA CCGAGGAAGA AGCCCGTCGG GTTGTCGCGG TCGCGCTCGT GGACCGGATG
TCCGCGCTGT GGCTGGTGCT GCTGGCGCTC GGGCTGCGCA AGGGGGAAGC GCTCGCGCTG
CGCTGGGATG CGCTCGACCT TGATGCGGGC ACGGTCGCCG TGGTGCGCAA GCAGCGGCGT
CGCAAGGCGG GAATTGATCC GGAGACCGGC CGGCAGCGCT GGGAACTCGT CGAAGAGGAA
GCCCTGAAGA CGAAGGGTTC AAAGGCGGTT CTCGCACTGC CCGACATGGT CGTCACGATG
CTCCGTGAGC ACCGGTGGCG GCAGGACGAC GCGAAAGCCG ACCTCAGCGC CAAAGCGGAC
CAGGCGGAAA AGGACCTGGC GGCGCTGGCC GCGCAGAACC TCCCCGAGGG GGTGTCCGGG
ACTCCGGCGG ACCTGAAGGT CATCCGGTGG GAAGACCCCG GACTGGTGTT CACTACCGCA
CTCGGGCGGA AGGTCGACCC GCGCAACGTC AACCGGTGGT GGGACGCGGT GTGTGAGCGG
GCTGAGGTGC GGCACACCCG CGTGCACGAT CTCCGCCACA CGGCGGCGAC GATGCTGTTC
CGGGCCGGCG TCGACCTGAA CGAGATTCGC GCGCTTCTGC GTCACACCCG CCTTGGCACC
ACCGCGGACA TCTACGTTGA CGTTCTGGCG GACGTCCGGC GGGGGACGGC CCGCAGCATG
GACGACATCC TCACCCGGCT CCGGAACCCG ACCACCGCTA CGGAGAGTGA GGCAGACGAG
GGTGCCGCCT GA
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| Protein sequence | MARRQPPGRG LMAEGKGSRR GNGEGSIYRY RNGWAGQISM PDGTRPTFYG KTKDDVRGKI
IAALRAVQDG VPLVTTRMTV AEYLDQWVTI VLPSRVVAGT LAESTAESYA DQVRLHITPI
LGRHELRKLS TAHVRHWMTR KLTEPSSAGL AQCAAWEAEA ARKAAERAKE KKTRPARRAT
AQKKAPAPSE RKPVKPLSAR SVRYLLVILT AALNDAVREE LLTRNVAALV QPPRKADAPI
RALTEEEARR VVAVALVDRM SALWLVLLAL GLRKGEALAL RWDALDLDAG TVAVVRKQRR
RKAGIDPETG RQRWELVEEE ALKTKGSKAV LALPDMVVTM LREHRWRQDD AKADLSAKAD
QAEKDLAALA AQNLPEGVSG TPADLKVIRW EDPGLVFTTA LGRKVDPRNV NRWWDAVCER
AEVRHTRVHD LRHTAATMLF RAGVDLNEIR ALLRHTRLGT TADIYVDVLA DVRRGTARSM
DDILTRLRNP TTATESEADE GAA
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