Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0388 |
Symbol | |
ID | 3903440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 460203 |
End bp | 460688 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637877717 |
Product | hypothetical protein |
Protein accession | YP_479504 |
Protein GI | 86739104 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCTCG ACTGGGACCC CTCAGGACCG GTGTTCACGA CCCTCGACGG CGATCCTCTG CATCCCGCCG CCGTCTCCGC CGAGTTCCAG GACCAGATCG CGAGAGCCGG GGTACCCCCG ATCCGCCTTC ACGATGCCCG GCACGTCGCC GCCACCCTCA TGCACGGCGG CGGCGCGGAC CTGAAGGTCA TCCAGGAGAC CCTCGGCCAC TCCAGCCACG AGGTGACGGT CAACACCTAC ACCTCGGTCC TGGAAGAACT CGCCCGGGAA GCCGCCGAAG GCGCCGCCCG ACTCGTCCCC CGCACTCCAC CCACTCGGGC CGCGCACACC CCGCGCACAC CCGACAGGTC ACAAGAAGAT CGAATAGGAG AAAAACCGCA GGTCAAGCAG GGTGCGCTCG GCAACGCACC ACAAACACCC CCACCAGCAC GGTTGCGGAT CACACACGCG ATCATACTGT CGGCGACCAG AGCTCAGTGG TGTTGA
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Protein sequence | MGLDWDPSGP VFTTLDGDPL HPAAVSAEFQ DQIARAGVPP IRLHDARHVA ATLMHGGGAD LKVIQETLGH SSHEVTVNTY TSVLEELARE AAEGAARLVP RTPPTRAAHT PRTPDRSQED RIGEKPQVKQ GALGNAPQTP PPARLRITHA IILSATRAQW C
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