Gene Francci3_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0388 
Symbol 
ID3903440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp460203 
End bp460688 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content67% 
IMG OID637877717 
Producthypothetical protein 
Protein accessionYP_479504 
Protein GI86739104 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCTCG ACTGGGACCC CTCAGGACCG GTGTTCACGA CCCTCGACGG CGATCCTCTG 
CATCCCGCCG CCGTCTCCGC CGAGTTCCAG GACCAGATCG CGAGAGCCGG GGTACCCCCG
ATCCGCCTTC ACGATGCCCG GCACGTCGCC GCCACCCTCA TGCACGGCGG CGGCGCGGAC
CTGAAGGTCA TCCAGGAGAC CCTCGGCCAC TCCAGCCACG AGGTGACGGT CAACACCTAC
ACCTCGGTCC TGGAAGAACT CGCCCGGGAA GCCGCCGAAG GCGCCGCCCG ACTCGTCCCC
CGCACTCCAC CCACTCGGGC CGCGCACACC CCGCGCACAC CCGACAGGTC ACAAGAAGAT
CGAATAGGAG AAAAACCGCA GGTCAAGCAG GGTGCGCTCG GCAACGCACC ACAAACACCC
CCACCAGCAC GGTTGCGGAT CACACACGCG ATCATACTGT CGGCGACCAG AGCTCAGTGG
TGTTGA
 
Protein sequence
MGLDWDPSGP VFTTLDGDPL HPAAVSAEFQ DQIARAGVPP IRLHDARHVA ATLMHGGGAD 
LKVIQETLGH SSHEVTVNTY TSVLEELARE AAEGAARLVP RTPPTRAAHT PRTPDRSQED
RIGEKPQVKQ GALGNAPQTP PPARLRITHA IILSATRAQW C