| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0383 |
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| Symbol | |
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| ID | 3903435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 456092 |
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| End bp | 458050 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637877712 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_479499 |
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| Protein GI | 86739099 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGTCGC GTACCGACCG TTCGTCCTCG TCCACCTCGA AGGCCGTCAC CTCGTCCCCG
TCCACCTCAT CCTTGTCGTC CGCCGCATCC TCCCCGTCCG TCTCGTCCTC GTCCTCCTCG
TCGTCCGTCT CGGCCGCGGG GATGACGGCG GTCTCGACGG GTCCGCTGAC GGGCAGCCGC
AAGACCTGGC TGGTCGGAGC GGATCCCGAT CTGCGGGTGC CGATGCGGGA GATCGTGCTG
ACCACGGGTG ACACCGTCGT GGTGTACGAC ACCTCCGGTC CATATACCGA TCCGGGGGTG
ACGATCGATG TGCGCCGGGG TCTGCCGGCG ACGCGGGACA GCTGGATCGC CCAGCGTGGC
GACACCGCGC CGGATGAGCG GCGGACCGTT CCCGGGACCG GGGCATCGGG TCCTGGGACG
CTCGGTTCTG GGACGCCCGG TTCTGGGACG CCCGGTTCTG GGCCGCTCGG TCTCGGCGGG
ACGGATCTCG ACGGGCGGGT GCGAGTGCCC CGTCGGGCGG TGCCGGGACG GCCTTCCATA
ACCCAGCTGG GCTACGCCCG CCGCGGTCAG ATCACTCGGG AGATGGAGTT CGTCGCCCTG
CGGGAGGGTC TTCCCGTCGA GACGGTGCGG GCGGAGATCG CCGCGGGGCG GGCCGTGCTG
CCGGCGAACG TGAACCATCC CGAGTCCGAG CCGATGGCGA TCGGCCGTGC GTTTCTCGTG
AAGATCAATG CGAACCTCGG CAACTCGGCC GTTACCTCCT CGATCGAGGA GGAGGTCGAG
AAGATGGTGT GGGCGACCCG CTGGGGCGCG GACACCGTGA TGGACCTCTC GACCGGGTCG
GACATCGCCC TGACCCGTGA GTGGATCATC CGTAACGCGC CGGTGCCGGT CGGGACCGTG
CCGATCTACC AGGCGTTGGA GAAGGTCGGT GGCCGGCCGG AGAAGCTGTC CTGGGAGGTC
TACCGGGACA CCGTGATCGA GCAGTGCGAG CAGGGTGTGG ACTACATGAC GGTCCACGCG
GGGGTGCTGC TGCGCTACGT GCCGCTGACC GCGCGGCGCA GGACCGGGAT CGTCTCGCGC
GGCGGCTCGA TCCTGGCCTC CTGGTGCCTG GCCCATCACG AGGAGAACTT CCTCTACACC
CACTTCGCCG AGCTGTGCGA GATCTTCGCC GCGTACGACG TCACGTTCTC TCTGGGCGAC
GGCCTGCGGC CCGGGTCCAT CGCGGACGCG AACGATGAGG CCCAGCTCGC CGAGCTCGCC
ACCCTGGGCG AGTTGACGCA GGTGGCGTGG GAGCACGACG TCCAGGTGAT GATCGAGGGA
CCCGGGCACG TGCCCATGAA CAAGATCGAG GAGAACGTGC AGCTGCAGCG GGAGCTGTGC
CACGACGCGC CGTTCTACAC CCTCGGGCCG CTGACCACCG ACATCGCCCC CGGCTACGAC
CACATCACCT CCGCGATCGG GGCGGCGATG ATCGGATGGG CCGGTACCGC CATGCTCTGT
TACGTCACCC CGAAGGAGCA TCTCGGCCTG CCCGACCGGG ACGACGTCAA GGCCGGCGTT
ATCGCCTACA AGATCGCCGC GCACGCCGCC GACCTCGCTA AGGGGCATCC CGGCGCGCAG
GCCTGGGATG ACGCCCTGTC GGACGCCCGG TTCGAATTCC GCTGGGCCGA CCAGTTCCAC
CTCGCGCTCG ACCCCGACAC CGCACGCGCG TTCCACGACG AGACGCTGCC GGCCCCGGCC
GCGAAGTCGG CGCACTTCTG TTCGATGTGC GGCCCGCACT TCTGCTCGAT GAAGATTTCC
CACCAGGTGC GGGCACACGC GGGCGGGGAC GGGCTGGACC CGGCCGGGCA TGGCGCGGAC
CCGGCCGGCG ACGAGGCGGT CACCGCCGGC CTGCGCGAGA AGGCCGCCGA GTTCAACGCC
GCCGGCAATC GGATCTACCT TCCGGTGGCC AACTCCTGA
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| Protein sequence | MVSRTDRSSS STSKAVTSSP STSSLSSAAS SPSVSSSSSS SSVSAAGMTA VSTGPLTGSR
KTWLVGADPD LRVPMREIVL TTGDTVVVYD TSGPYTDPGV TIDVRRGLPA TRDSWIAQRG
DTAPDERRTV PGTGASGPGT LGSGTPGSGT PGSGPLGLGG TDLDGRVRVP RRAVPGRPSI
TQLGYARRGQ ITREMEFVAL REGLPVETVR AEIAAGRAVL PANVNHPESE PMAIGRAFLV
KINANLGNSA VTSSIEEEVE KMVWATRWGA DTVMDLSTGS DIALTREWII RNAPVPVGTV
PIYQALEKVG GRPEKLSWEV YRDTVIEQCE QGVDYMTVHA GVLLRYVPLT ARRRTGIVSR
GGSILASWCL AHHEENFLYT HFAELCEIFA AYDVTFSLGD GLRPGSIADA NDEAQLAELA
TLGELTQVAW EHDVQVMIEG PGHVPMNKIE ENVQLQRELC HDAPFYTLGP LTTDIAPGYD
HITSAIGAAM IGWAGTAMLC YVTPKEHLGL PDRDDVKAGV IAYKIAAHAA DLAKGHPGAQ
AWDDALSDAR FEFRWADQFH LALDPDTARA FHDETLPAPA AKSAHFCSMC GPHFCSMKIS
HQVRAHAGGD GLDPAGHGAD PAGDEAVTAG LREKAAEFNA AGNRIYLPVA NS
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