Gene Francci3_0376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0376 
Symbol 
ID3903427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp442980 
End bp443384 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content64% 
IMG OID637877705 
Producthypothetical protein 
Protein accessionYP_479492 
Protein GI86739092 
COG category[S] Function unknown 
COG ID[COG3304] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.599891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTCG TGCTCAACGT CATCTGGTTG GTATTCGGTG GTTTCTGGCT TGCCGTCGGC 
TATGCCCTCG CAGCGCTTGT GTGCTTCATT CTCATCGTCA CGATTCCCTT CGGGATCGCC
GCCCTGCGGA TGGCGAACTT CACCCTGTGG CCGTTTGGAC GGCGCATTGT CGACCGACCC
GGCGCCGGCG GGGCGTCCCT GGTCGGAAAC GTGCTGTGGA TCCTGCTGGC CGGTTGGTGG
TTGGCACTGG GACATCTCAC CACCGGCCTG GCACTCTGCC TCACCATCAT CGGTATCCCG
CTCGGGTTGG CGAACTTCAA ACTGATCCCG GTCTCGCTGC TGCCGCTGGG TAAGGAGATC
GTGGACGTCG ACGCCCCCGC GGTCGGAGCT CGCGCGGCAT TCTGA
 
Protein sequence
MRLVLNVIWL VFGGFWLAVG YALAALVCFI LIVTIPFGIA ALRMANFTLW PFGRRIVDRP 
GAGGASLVGN VLWILLAGWW LALGHLTTGL ALCLTIIGIP LGLANFKLIP VSLLPLGKEI
VDVDAPAVGA RAAF