Gene Francci3_0358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0358 
Symbol 
ID3905417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp417342 
End bp418430 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content71% 
IMG OID637877687 
Productmethyltransferase type 11 
Protein accessionYP_479474 
Protein GI86739074 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCAT GGGTCACCGT GGAAAGTCCA GACAACATCG CCGACAGCAC CGGCACAATC 
GACAGCATCG GCACCACCGG CCCGACCGAC CGCACCAGTC CGAGCCACAC CGGCCCAAGC
CACACCGGCC CAAGCCACAC CGGCCCAAGC CACACCGGCC CAAGCCACAC CGATCAGGAC
GGTTCCGCGC CGCTGCCGGC CTACGGCTAC CGTGACATCG ACCCGGACAC GGCCCGCCGG
GCGAGCCGCT TCTACTGGGA CGATGCCGCG GCGGACTACC AGTCGGAGCA CGGCGCGTTC
CTCGGCGACA GCGACTTCTG CTGGTGCCCG GAGGGACTGC GGGAGTCCGA GATCGGGTTG
CTCGGCGACG TCGCCGGCAA GGTGGTCCTG GAAGTCGGCT GCGGCGGCGC GCAGTGCGCC
CGCTGGCTGC GCGGGCAGGG CGCCCGGGTG GTGGGATTCG ACCTGTCCGG CGGACAGCTG
GACCAGGCCC GCGCGCTCGG GATCCGCACC GGTATCGATG TGCCGCTCGT CCAGGCGGAC
GCCACGGCGC TCCCGTTCGC GGCCGCCAGC GTGGACGTGG CCTGCTCGGC GTTCGGCGCG
GTCCCGTTCG TCGCCGACAG TGGCACCGTG ATGCGGGAGA TCGCCCGGGT GCTGCGGCCG
GGCGGCCGCT GGGTGTTCTC CACGACCCAT CCGTTCGTCT GGTGCCTGCC GGATGACCCG
GACGAGAACG GCCTGCGGGT CTTCCACAGC TACTTCGACC GACGCGCCTA CACCGAGCAT
GACGAGCAGG GCAGCGCGAT CTACACCGAG ACGCACCGCA CAATGGGCGA CCGGGTCCGC
GAGATCGTCG CCGCGGGATT GATCCTGCTC GACGTCATCG AGCCGGAATG GCCTCCTGGC
CAGGAGCGGG CCTGGGGGCA ATGGGGACCG ATCCGGGGCG GATACGTCCC CTCCACCTCG
ATCTTCGTAA CCCAGCTCCC TTCCGGGGCC TCGGGTGCCG ATCAGCATGG ATGCGGCGCG
TACCAGGCCA CCGACTCAAC GCCGCGACGG GCTGACACAC TATGCGAACA ACGCCCCAGG
GTGCGGTGA
 
Protein sequence
MPAWVTVESP DNIADSTGTI DSIGTTGPTD RTSPSHTGPS HTGPSHTGPS HTGPSHTDQD 
GSAPLPAYGY RDIDPDTARR ASRFYWDDAA ADYQSEHGAF LGDSDFCWCP EGLRESEIGL
LGDVAGKVVL EVGCGGAQCA RWLRGQGARV VGFDLSGGQL DQARALGIRT GIDVPLVQAD
ATALPFAAAS VDVACSAFGA VPFVADSGTV MREIARVLRP GGRWVFSTTH PFVWCLPDDP
DENGLRVFHS YFDRRAYTEH DEQGSAIYTE THRTMGDRVR EIVAAGLILL DVIEPEWPPG
QERAWGQWGP IRGGYVPSTS IFVTQLPSGA SGADQHGCGA YQATDSTPRR ADTLCEQRPR
VR