Gene Francci3_0357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0357 
Symbol 
ID3905416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp416722 
End bp417285 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content69% 
IMG OID637877686 
ProductOmpA/MotB 
Protein accessionYP_479473 
Protein GI86739073 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTATCACG CTCACTCCAC ACCCGGAGAT GCCACGTTCA GGCGACGCGG CAATCCGGCC 
GTCCGCACGT GCGCGGGCGT GGTCATGACA GCGGCGCTGG GGCTCGTGGC CGGGTGCTCC
TCCAGCGGCG GCGACACCGC CTCGTTCACT CCGGCGCCAC GGGCTACCCG GATCGCGCCT
GCCGTCGCGG CTGATCCGTT GCCACCGTTG AGCAAGTTCA TCACCCAGCC GGACGGCAGC
CAGGTGACGA CGGTCAGCGC TGACTACCTG TTCGACTCGA ACAGCAGTGA GCTCCGGAGG
GAGGCCGTGA CCGCGTTGGG GCAGATTCTG CCGTCGATCC GTGAACACCC CGGCCACATC
GCGGTCATCG GGTACAGCGA TGGGCTGGGT CGGACCGAGG ACAACCTGCG GCTGTCGCAG
GATCGCGCCA AGGCGGTCGA GTCGTGGCTT GCTACTCAGG GCATCCCCGG CTCGGTGCTG
GAGGTCGAGG GCAAGGGCGA GGAAGGCGCG CAGGACGGCG TCGCCGACGC GAGCCGGCGC
CGAGTGGAGA TCGTGCTGCG ATGA
 
Protein sequence
MYHAHSTPGD ATFRRRGNPA VRTCAGVVMT AALGLVAGCS SSGGDTASFT PAPRATRIAP 
AVAADPLPPL SKFITQPDGS QVTTVSADYL FDSNSSELRR EAVTALGQIL PSIREHPGHI
AVIGYSDGLG RTEDNLRLSQ DRAKAVESWL ATQGIPGSVL EVEGKGEEGA QDGVADASRR
RVEIVLR