Gene Francci3_0301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0301 
Symbol 
ID3903333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp349944 
End bp350447 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content61% 
IMG OID637877630 
ProductXRE family transcriptional regulator 
Protein accessionYP_479417 
Protein GI86739017 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCTACC GCCGGGCGGT CCCCTACGCG CGGAGCACCG GGAGTCAGCC TCCAGTGGAT 
CTAGCCCGTC AGCATGACGG GAGCCGGGGG CCATGTGTCG TGTCTCTCGC GCGGCTCCGA
AAGTCGTCAT GGGGTCTGGC CGATTTCGGG CCTCAGAAAG TCAATCCCGG GCCTACGAAC
TTGCGGGACG TCCTGAGCAG TCGGTGGGAA TTCTTGCGGG CCTCTGCTAC GCTCCGCATC
GGAGGTGACG GCATGCCCGA CATAATGCCT GGTGACAGGA TTGCCCAGAT ACGGCGTAGG
CGCTCTCTCT CACAGGAAGA GCTAGCCGCA CGCTCTGGTG TCAGCGTCGC CGTAATCAGA
AAGCTAGAGC AGAATCGACG GGCGGGGGCT CGAATAGAAA CGCTTCATGC GTTGGCCCGT
GGTCTGAACG TTAAGACCTC TGAGCTTTTC GATAACGGCG AATCTGTGGC CAGGGTGACC
CGCAAAGTCT GTTTGTGCAG GTAG
 
Protein sequence
MIYRRAVPYA RSTGSQPPVD LARQHDGSRG PCVVSLARLR KSSWGLADFG PQKVNPGPTN 
LRDVLSSRWE FLRASATLRI GGDGMPDIMP GDRIAQIRRR RSLSQEELAA RSGVSVAVIR
KLEQNRRAGA RIETLHALAR GLNVKTSELF DNGESVARVT RKVCLCR