Gene Francci3_0299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0299 
Symbol 
ID3903331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp347324 
End bp348337 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content58% 
IMG OID637877628 
Producthypothetical protein 
Protein accessionYP_479415 
Protein GI86739015 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.206461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.73105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCCGC GGGACTCTCT TCAGGAACCT AGTCTCTGGG CACTGCGGAA GACGCTAATG 
CCTTCGTCGG ATAGCCTGAA TTCTGCCCCC GCCAGCGAAC CACCCGCGCT AGACGAAATT
GGCAAAACCT TGGCTCGGGC GGGGCGCGCT TACAACAGTT CTCGCTATCA GCTCGCCGCT
ACAGAGCTGC CCGGGATACT CGATGCGGCA CAAGTAGCAG TGTCGCACTA TGACGGCGAC
GATGAACTAA CCGCATTGCG CTATCTGGCT CAGGCGTACC GCCTTGCAGG GGCCGTACTC
ATCTACCTTC GACACGAAGA CCTCGGCTAT TGGTCTGTGA TGAAGGCAAA GGAGACGTCA
TCCCGTGCGG GTAGCGAAAT CCTAGATGCG ACCGCCACCG GCGTGCTGTC ATGGTATCTA
CTAAGACAAA GGCGCTTCGA TGAAGCGGAA GAAATCGCGG TACGCGCTGC CGAAAACATC
GAACCTTCGA TGACCAAGGC CACACCTCAG CATCTCTCGG TGTGGGGAAC ATTGCTTCTT
CGAGGTAGTA GCGCGGCATC CCGAAATAAC CGGCCTGATA CATCGCACGA ACTGATCCAA
CTTGCTCGCA TGGCGGCTGT TCGGGTCGAG ACCGACAGGA TAGATTACGG GCCGCATGCA
TGGATCTCTT TCGGGCCGAC TGTGGTCGAG ACGGCATCCG TTGAAAACAC TCTTATAGGT
GGCGATCCGT CTCTAGCACT CCACCTGGCT CGGTCCGTCC GACCATCGAA GAAGATGTCT
TCGGGTAGGT GGTCTCGCCA TCTACTGACC GTGGCCGAAG CGCAGGTCTC TACGCATAAT
TACCCGGGTG CAACGAGAAC TCTGGTGAGC ATCCGAAAGT CTGCTCCCGA ATGGCTGAGA
AATCAACGGA CGGCGCATTC ATTGGTCGGC ACATTGTTGG ATGCTACCGG CGTCCGCACC
GCAAAGAGTA GTGGCCTTAG CGAGATGGCC GACTTCATGG ACCTCCGACC ATGA
 
Protein sequence
MAPRDSLQEP SLWALRKTLM PSSDSLNSAP ASEPPALDEI GKTLARAGRA YNSSRYQLAA 
TELPGILDAA QVAVSHYDGD DELTALRYLA QAYRLAGAVL IYLRHEDLGY WSVMKAKETS
SRAGSEILDA TATGVLSWYL LRQRRFDEAE EIAVRAAENI EPSMTKATPQ HLSVWGTLLL
RGSSAASRNN RPDTSHELIQ LARMAAVRVE TDRIDYGPHA WISFGPTVVE TASVENTLIG
GDPSLALHLA RSVRPSKKMS SGRWSRHLLT VAEAQVSTHN YPGATRTLVS IRKSAPEWLR
NQRTAHSLVG TLLDATGVRT AKSSGLSEMA DFMDLRP