Gene Francci3_0298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0298 
Symbol 
ID3903330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp346650 
End bp347126 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content57% 
IMG OID637877627 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_479414 
Protein GI86739014 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.39007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.701373 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTCGGAT ACGGTCGTCA GACTCCGGAC TCACTCGAAA ACCGGCGAGA AGGAGTCCAG 
CATCAGGCAC GAGGTACCGA CGATCAACTA CGATTCACCG TCTACGACAT AACGACAACC
CCGCCAACCC CTGTGGGGAC CACTGCCGTA CTCATCGATC ATCACGTACG GACCGGCGAG
TTTATAATCC AGCTCAACCC GTCCAGCCGA GGCAAAGGTA TAGGAACCGA AGCTACCCGC
CTAACACTCG ATTACGCCTT TCATATTTCC AATCTTCGAT GCGTCTACCT GTCGGTGCTG
ACCCCGAACA CAGGAGCAAT CCGCGCCTAC GAGAAGGCCG GATTCCGGAA GATCGGGGAA
CGGCGACAGT CCGGGTATTG GCTCGGCCAG TCTGCCGATG AGACCCTCAT GGACGCTATA
CCGGCAGAAT TTCCCGGACC CTCCCTCGTG CGACAACTAG TCAATCCGGA TTCGTAA
 
Protein sequence
MVGYGRQTPD SLENRREGVQ HQARGTDDQL RFTVYDITTT PPTPVGTTAV LIDHHVRTGE 
FIIQLNPSSR GKGIGTEATR LTLDYAFHIS NLRCVYLSVL TPNTGAIRAY EKAGFRKIGE
RRQSGYWLGQ SADETLMDAI PAEFPGPSLV RQLVNPDS