Gene Francci3_0289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0289 
Symbol 
ID3903033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp334995 
End bp335774 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content72% 
IMG OID637877618 
Producthypothetical protein 
Protein accessionYP_479405 
Protein GI86739005 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.842009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.70483 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTGCG AGGTGGTCAT GGCCGAGACG TTGGTGACCT TGGTGGAGGC CGCGCATCAG 
GATGCCGTCC GTCTGATCGA GCTCTCGCGC GACGTCGGTG CCCACGGTGA CGTGGATGGT
CCGTCGACCG ACCCGCGGCA GGCGCTGCGC GCCAGCGACG CGGCCGTGGC CGCCGTCTCC
GCGCACCTGA GCGCGATGGA GTCGGTGGTC TACCCGGAGA TGGCCCGCCG GGTCGTGGGC
GGCCGGGCGC GGGTGGCGGA CCTGGGCCGC TTGGCGCGGC GCTGCTCCTC GGTGATGCGC
GGCATTGAAC AGTACGTCCA GGGGGACCTC AACCGGCCCG CGGAGCCGGT CGCGAACCTG
CGCCGGGATC TGGCCGCGTT GATGGTCGAA CATGCGACGC TGGAGGACGA ACTTCTGCGT
GAGCTGATGG CCGAGCTGTC CGACGACGAG CGCCGGGATC TCCTCGACCG CTTCTCCGAC
GCGATGCGCC ACGCTCCGAC CCGACCGCAT CCGCACCTTC TGCACAGCAG GCTGTTCGGT
GGAAGCCTGG CGGCCCGCCT GACGGGCTAC TGGGATCACC TGCTCGACGT GATGGACGCC
CGGGAGGTGC CCGGCGCGCC GAGGCGGGCC CCGGTGCCCG CCGGGCTGTG GGGCTGGTAC
CTGCTGGGCC GTCCCACGGC GCCGGCTGCG GGTGAGACCC CGTCAGGGAA GGAAGGCGCG
CAGGGCGACA CCACCGCTGG TAGCCACAAC GTCACTGGTG GCCACATCGC CGCTCATTGA
 
Protein sequence
MGCEVVMAET LVTLVEAAHQ DAVRLIELSR DVGAHGDVDG PSTDPRQALR ASDAAVAAVS 
AHLSAMESVV YPEMARRVVG GRARVADLGR LARRCSSVMR GIEQYVQGDL NRPAEPVANL
RRDLAALMVE HATLEDELLR ELMAELSDDE RRDLLDRFSD AMRHAPTRPH PHLLHSRLFG
GSLAARLTGY WDHLLDVMDA REVPGAPRRA PVPAGLWGWY LLGRPTAPAA GETPSGKEGA
QGDTTAGSHN VTGGHIAAH