Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0282 |
Symbol | |
ID | 3903025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 327001 |
End bp | 328251 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637877611 |
Product | Mur ligase |
Protein accession | YP_479398 |
Protein GI | 86738998 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACAT CAATCCCCCG CCGGTTCACC GCCAGGACCC AGGCCGCGCT CGCCGTTGAA CGCCTGGCGG CCGAGGCGTC ACGCCGGCTC GGCCGTGGTT CCGGCGAGAT GATCGGTGGC AAGCTCGCGC TGCGGGTATC CCCGGCGGCG CTCGCCGAGG TCGGCTCCCA CCGGATGACC GCCTGCGTGT CGGGCACCAA CGGCAAGACC ACCACCACGA GGCTGCTTGC CCGGGCCCTG GGCACCCTGG GGCCGGTCAA GTCGAACAGC GGCGGGGCGA ACATGGCGCC CGGGGTGCTG GCCGCGCTGT CCCGGCCGCC GTTTGACGCG GCGGCGGCTC TCGAGGTGGA CGAGATCTGG CTGCCGAAGG TGGCCAGGGA GATCTCGCCG CGGGTGGTCC TGCTGCTGAA CATCAGCCGT GACCAGCTCG ACCGGTCCAA CGAGACGCGG CGCATCGCCG CCATGTGGCG CGAGCTCGGC TCGGAGCTGC GCGACACGAC GGTGGTCGCG AACGTCGATG ATCCCCTGGT GGCCTGGGCG GCGGCGGGCT GGCACCGGCA GGTCTGGGTG TCGGCGGGGC AGAACTGGAC GGCGGACGCG ATGGTCTGCC CGCAGTGCGC CCGGCTGCTA CACCGCAACA GCAGCGGCTG GTGGTCCGAG TGCGGGCTGG CCAGGCCCGA GCCGATCGTC GCGGTCACCG GCTCCCGGGA ACTACTCTGG TACGGCCGCA CCATCGAGGC CCGGCTCGAT CTGCCCGGAC GGGTGAACCT CGGCAACGCG GCGATGGCCG CCGCCGCGGC CCGGGAGTTC GGCGTCGAGA TCGAGGATGC GCTTGCGGCC ATGACCGGCC TGGGCGATGT GCAGGGTCGC TATCAGGAGG TGGCGCTCGG CGAGGAGGGC CATCGAGGCC GGCTGCTGCT GGCGAAGAAC CCCGCTGGCT GGGTGGAGAT GATGGAGCTG TTGGCGGACG CGCCGCCGCG GCCTGTCGTC ATCGACTTCA ACTCCCAGAC CGCTGACGGG CGGGATCCGT CCTGGATCTG GGACGTGCCG TTCGAACGGC TCGCCGGCCG GCAGGTGCTG GTCACCGGGG AGCGCAAGGA GGACATGAGC GTGCGGCTGG CCTATGCGGA GGTGCCGCAC AGCGTGTATG CCAGTGCGCG GGACGCGGCC CTGGCCGCCA ACGAGAAGGT GGTCGACGTC GTCGCCAACT ACACGGCGTT CCGCGATCTG CTGGTGAGGT CCACGCAGTG A
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Protein sequence | MTTSIPRRFT ARTQAALAVE RLAAEASRRL GRGSGEMIGG KLALRVSPAA LAEVGSHRMT ACVSGTNGKT TTTRLLARAL GTLGPVKSNS GGANMAPGVL AALSRPPFDA AAALEVDEIW LPKVAREISP RVVLLLNISR DQLDRSNETR RIAAMWRELG SELRDTTVVA NVDDPLVAWA AAGWHRQVWV SAGQNWTADA MVCPQCARLL HRNSSGWWSE CGLARPEPIV AVTGSRELLW YGRTIEARLD LPGRVNLGNA AMAAAAAREF GVEIEDALAA MTGLGDVQGR YQEVALGEEG HRGRLLLAKN PAGWVEMMEL LADAPPRPVV IDFNSQTADG RDPSWIWDVP FERLAGRQVL VTGERKEDMS VRLAYAEVPH SVYASARDAA LAANEKVVDV VANYTAFRDL LVRSTQ
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