| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0248 |
|---|
| Symbol | |
|---|
| ID | 3903656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 286491 |
|---|
| End bp | 287126 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637877576 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_479365 |
|---|
| Protein GI | 86738965 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCGA CATACACGGC CGTACTGCCG TTCCAGGACC ACACGGTCGA GTTCGTCACC
GGACTGCTGG AAGCGGAACG TGTCCGCCGC GGCACCCGGA AGGGGACACG GAAGCTCACC
AGTCGTGAGC AGGCGGTGCT CGTGCTGCGC TGGTTCGCCG ACGCCACCCG GGTCGCCCAA
CTGATCGTCG ACCATGGGAT CAAGAAGTCG ACCGGCTACG ACTACCTCCA CGAAGGGATC
GCCGTGCTGG CCGAGCGCGC CCCGAAGCTG GAATCCGCCC TGCTCGCCGC GAAAGCCGCC
GGTCACAGCC ACGTCAGTGT CGATGGCACG CTGATCGAGA CCGACCGGAA CGCCACCCCG
GGCCCGACCG CGGGAGTGGA CCTGTGGTGG TCGGGCAAGC ATGCCAATCA CGGCGGGAAC
ATCCAGGTCG TCACCGCGCC CGATGGCTGG CCGCTGTGGA CTTCCGAGGT GCGCCCCGGC
CGCGAACACG ACACCACCGC GCTGCGCGCG CACCCGCAGA TCTTGCCGGC GCTGGCGGTC
TGGATCGCCG CAGGCCTGCC GGTCCTGGGC GATCTGGGCT ACGAAGGCGA ACGCGACACC
GTGACCGTCG CGATCAAGAA GCCCAAGGGT GGCTGA
|
|---|
| Protein sequence | MSATYTAVLP FQDHTVEFVT GLLEAERVRR GTRKGTRKLT SREQAVLVLR WFADATRVAQ
LIVDHGIKKS TGYDYLHEGI AVLAERAPKL ESALLAAKAA GHSHVSVDGT LIETDRNATP
GPTAGVDLWW SGKHANHGGN IQVVTAPDGW PLWTSEVRPG REHDTTALRA HPQILPALAV
WIAAGLPVLG DLGYEGERDT VTVAIKKPKG G
|
|---|
| |