Gene Francci3_0237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0237 
Symbol 
ID3906541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp277305 
End bp278336 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content68% 
IMG OID637877566 
Producttyrosinase 
Protein accessionYP_479355 
Protein GI86738955 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.636465 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTCG TCCGGCGCGA CATCCTTCTC GACGACGACG CGAGAAAGGC CTATATCCGC 
GGAATCAAGC TCCTCAAACA CGAACCTACG ACGCTGCGCA CGAATCAGTT CGGCATCCCC
GGTCCGAGCC GACCGGTACG GACCTACGAC CTGTTCGTCA TCTGGCATGT CATCGCGATG
AACACCCCCG TCCCCCCGGG AGGGTCACCG AGCAACCGCA ACGCCGCGCA CGCCGGCCCC
GTCTTCCTGC CCTGGCACCG GGTCATGCTT GGCTGGCTGG AAGTGCACCT CCAGCGCGTT
CTCGGCGACC CGAACTTCGG GCTGCCCTAC TGGGACTGGG CGCGCGACGG GACACCCTCC
GCCCCCGCCA CGGCGCCGAA CCCCGCTGCT TCGGCACTGT GGCGGAACAC CCCGGACGGT
TTCGGGGGCC AGGGCACCCC GATCCCCGGC GGTGCGTTCT TCTTCGACCC CGCCGACCCG
ACCAGCTTCC GGGTACGGAT CTCCACCAGC AGCAGCGGCG CGCTCCAGCA GGTCGTCGAA
CGCGGCGTGC GGCGTAGATT CGGCAGCGCC ACGTTCGGAT CGTCGATCCT GCCGAGCAAC
GCCGATATCA CCGCAGCCTT CGACACCGTC GCCGATCCGA CACTCGCGAG CTACGACGAG
GCTCCCTTCA ACGTGAGTTC GCGGGGGTTC CGCAACCGTC TCGAAGGCTT CATCGGCACC
GGACTGCACA ACCAGGTCCA CCGCTGGGTT GGCGGGGGCA GGGACATGTC GCTGGCGTCG
TCCCCCAACG ACCCGGTCTT CTTCGTGCAC CACTGCAACG TCGACCGTGT CTGGGAGGGT
TGGATGCGGC GTCACGGCCG CGTGTACCAG CCGGACATGA CCGCCCCGGC AAGCCTCCTC
GGCCATCGGA TCGACGACCC GCTGGTCTCC CCGTTCGCCC CGTCGAGCAC GTCGAGCACG
CCGAGCACCC CGGCGACCCC CCGCAGCGTG CTCGACATGA CCGACACCTA CACCTACGAC
GTCCTGCCCT GA
 
Protein sequence
MAVVRRDILL DDDARKAYIR GIKLLKHEPT TLRTNQFGIP GPSRPVRTYD LFVIWHVIAM 
NTPVPPGGSP SNRNAAHAGP VFLPWHRVML GWLEVHLQRV LGDPNFGLPY WDWARDGTPS
APATAPNPAA SALWRNTPDG FGGQGTPIPG GAFFFDPADP TSFRVRISTS SSGALQQVVE
RGVRRRFGSA TFGSSILPSN ADITAAFDTV ADPTLASYDE APFNVSSRGF RNRLEGFIGT
GLHNQVHRWV GGGRDMSLAS SPNDPVFFVH HCNVDRVWEG WMRRHGRVYQ PDMTAPASLL
GHRIDDPLVS PFAPSSTSST PSTPATPRSV LDMTDTYTYD VLP