| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0235 |
|---|
| Symbol | |
|---|
| ID | 3906539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 274454 |
|---|
| End bp | 275956 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637877564 |
|---|
| Product | periplasmic sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_479353 |
|---|
| Protein GI | 86738953 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCCGGC CGGTCCTGTC CCTGCGGGCC CGGCTGCTGC TGGCCCTGGT GGGCCTGCTG
GCCGTCGGGA TGGCTCTCGG CGCCGTCGGC ACGCGAGGGG CTCTGGGGGC CTACCTGCGT
GGCCGGCTGG ACCAGCAGGT CCGGGACGCC CATCCGCTGA TGGAGCAGTT GCTCCTGCGG
GCCGGCGGGG ACGGGGACGG GGATGACCAC TACCCAGGTT TCGGCACCAC GTTCCTGGTG
GGCACCTACG GCGCGTTGTA CGACGGCGCC GGCCGCCGGC TCGCCGAGGC CAGCCCCGGC
CCGGGTGGCC CGGGTGGTCC GGGTGGCCCG GCGGCGCCGA CGCAGCGTCC GGCGGTGTCG
GCACGCCTGC TCGCCACCGC CCGGCTGCAT CCGGACCTCG CGACCGTCCC GCTGTGCACG
GTGGGCGCCG AGGACCATGG CGGCCGGTTC AGGATGCTCG CGGAGCGCTT CGACAACGGG
TATGTGCTGA TCGTCGCCGT GCCCTTCGCG GAGGTGAACG CCACCCTTGA CCGGGTCACC
AGGATCGAGG TCGTGGCGAC CTCGGTGGTC ACGGCCGCGC TGGCCGTGCT GGCATACGTC
ATCATCCGGC TTGGGCTGCG TCCCCTGACC CGGATCGAGC AGACCGCGGA CCTGATCGCC
CACGGCGACC TGACCAGGCG GGTCGCCGAC GCGGACCGCC GGACCGAGGT GGGTCGGCTC
GGGCTCGCCT TCAACGCGAT GCTCACCCGG ATCGAGGCGG CGTTCCGGGC GCGTGAGGTC
TCCGAAGGGC GTCTGCGCCG CTTCGTCGGG GACGCGAGCC ACGAGCTGCG GACCCCGTTG
ACATCGATCC GCGGGTACGC CGAGATGTTC CACCGCGGCG CCGCGGAGCG GCCCGAGGAC
CTGGCGATGG TCATGCGCCG CATCGAGGAG GAGTCCGCGC GCATGAGCGA GCTGGTGGAT
GACCTGCTGC TGCTCGCCCG GCTGGACCAG CGACCGGTGC TGGAGCGCCA GCCGGTCGAC
GTCGCGGCGA TGGTCCGTGA CATCGTCACC GACGCCCGTG TGGTGAGCCC GGGACGGACG
ATCGAGGTCG ACGTGCCGCC GATCCTCGAG GTGCTCGGCG ATGAGGGCCG GCTGCGGCAG
GCCGTCGGCA ACCTCGTCCG CAACGCCGTC GTCCACACCC CGCCCGACGC CGGGATCTCC
GTCTCCGTGG GCCCCCTCGA AGCCGGCTCC CCGGGGCCGA CGGGCGATGG TCCCACCGAC
GGGATCGTGG TCTCGGTGGT CGACCACGGC CCGGGCGTCC CCGAGGATGC CGTGGCCCAC
CTCTTCGAAC GCTTCTTCCG GGCCGATGCC GGGCGGTCCC GGGACGCCGG CGGGACCGGT
CTGGGCCTGT CCATCGTCGA CGCCGTCGCC ACCGCGCACG GCGGGCGGGT CGAGTACCGG
CCGACCCCGG GCGGCGGGGC GACGTTCCGT CTCGTCCTGC CCGGTCCGTC GCAGCCCGAC
TGA
|
|---|
| Protein sequence | MSRPVLSLRA RLLLALVGLL AVGMALGAVG TRGALGAYLR GRLDQQVRDA HPLMEQLLLR
AGGDGDGDDH YPGFGTTFLV GTYGALYDGA GRRLAEASPG PGGPGGPGGP AAPTQRPAVS
ARLLATARLH PDLATVPLCT VGAEDHGGRF RMLAERFDNG YVLIVAVPFA EVNATLDRVT
RIEVVATSVV TAALAVLAYV IIRLGLRPLT RIEQTADLIA HGDLTRRVAD ADRRTEVGRL
GLAFNAMLTR IEAAFRAREV SEGRLRRFVG DASHELRTPL TSIRGYAEMF HRGAAERPED
LAMVMRRIEE ESARMSELVD DLLLLARLDQ RPVLERQPVD VAAMVRDIVT DARVVSPGRT
IEVDVPPILE VLGDEGRLRQ AVGNLVRNAV VHTPPDAGIS VSVGPLEAGS PGPTGDGPTD
GIVVSVVDHG PGVPEDAVAH LFERFFRADA GRSRDAGGTG LGLSIVDAVA TAHGGRVEYR
PTPGGGATFR LVLPGPSQPD
|
|---|
| |