Gene Francci3_0216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0216 
Symbol 
ID3905383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp252938 
End bp253426 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content64% 
IMG OID637877545 
Productcarbonic anhydrase 
Protein accessionYP_479334 
Protein GI86738934 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0288] Carbonic anhydrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.202706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.234797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTCA CCGACGACTA CCTGACCAAC AACGCCGCCT ACGCGAAGAC CTTCGCCGGG 
CCGCTTCCGC TGCCGCCGTC CAAGCACATC GCCGCCGTCG CCTGCATGGA CGCACGGCTC
AACGTCTACG CGATCCTTGG CCTGGGCGAC GGCGAGGCTC ACGTCATCCG CAACGCCGGC
GGCGTCGTCA CCGACGACGA GATCCGTTCC CTCGCGATCA GCCAGCGCCT GCTCGGCACC
CGCGAGATCA TCCTGATCCA CCACACCGAC TGCGGCATGC TGACCTTCAC CGACGACGAT
TTTAAACGCT CGATCCAGGA CGAGACCGGG ATCAAACCAG AATGGGCCGT GGAGTCGTTT
ACCGACCTGG CCGAAGACAT ACGCCAGTCG ATTGCGCGGA TCAAGGCGAG CCCGTTCATC
CCGCATACCG ACGCCATCCG CGGCTTCATC TTCGATGTTG CCACCGGACT GCTCACCGAA
GTCGCGTGA
 
Protein sequence
MSVTDDYLTN NAAYAKTFAG PLPLPPSKHI AAVACMDARL NVYAILGLGD GEAHVIRNAG 
GVVTDDEIRS LAISQRLLGT REIILIHHTD CGMLTFTDDD FKRSIQDETG IKPEWAVESF
TDLAEDIRQS IARIKASPFI PHTDAIRGFI FDVATGLLTE VA