Gene Francci3_0213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0213 
Symbol 
ID3905380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp251167 
End bp251547 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content71% 
IMG OID637877542 
ProductRieske (2Fe-2S) protein 
Protein accessionYP_479331 
Protein GI86738931 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.225427 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGTGGA CCGACGTCGC CTCGCTGGAC GAGGTGTGGG AAGGCGATGT GCTCGAGGTG 
ACCGCGGGCG CCGAGCAGGT GCTGCTGGCA CACCTGCCCG GCGGGGCGCT ACGGGCGTAC
CAGGCGGTGT GCCCGCACTC GCGGTTCCCG CTGGTCAACG GCGCCGTCGA GGACGGGGTG
CTCACCTGCG CCGCGCATCA TTGGGAGTTC GACCTGGCGA CCGGCGAGAG CCTCAACCCG
AGCGACTGCC GGCTGTACAG CTTCCCGGTG CGCGCCGACG GCGAGCGGAT CATTGTCGGG
ATCCCACCCG ACGGCCGACG TCACTACCAC CGCTGCCGTG GCGATGCGAC CGCGGCCCCG
ACGGGGAGAC GATTTTCATG A
 
Protein sequence
MAWTDVASLD EVWEGDVLEV TAGAEQVLLA HLPGGALRAY QAVCPHSRFP LVNGAVEDGV 
LTCAAHHWEF DLATGESLNP SDCRLYSFPV RADGERIIVG IPPDGRRHYH RCRGDATAAP
TGRRFS