Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0210 |
Symbol | |
ID | 3905377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 248256 |
End bp | 248930 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637877539 |
Product | MarR family transcriptional regulator |
Protein accession | YP_479328 |
Protein GI | 86738928 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.133838 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCGTGA GACCGCCCGG CACCCCCGAG GAACGCCACC CCGGACTCGA CGCGAAGATC GTGGCCGCCC TCGACCGGAT CGGCGAGGCC CTGCAGGTGC TCGCCCGCCG CCTGGCCGAG GCGCACGACC TGTCCCCCAC CCAGCTTCGG GTCCTCGCCC GCATCTATGC GGGACCACCC CCGCCGGCCC GAACCAGCGC GCTGGCACGT GAACTCGACG TGGCCGACCC CACCGTCAGC GACGCCGTGG CGGCCCTGCG CCGCAAAGGG CTCGTAGGCC GCCAGCAGGA CCCCGCCGAC CGGCGTCACT ACCGGCTACA CCTCACCGCC GACGGCCAAC GGACCGCGCA CGCGGTCTCC CGGTGGACCG CCCCGGTCGA GGTAGCGACC TCCAGGATCC CCCGCCCGGA CGGCGAGCAC CTGCTCGCAA CCCTCCTGGA CCTGCTGGAA TGCCTGCACG CCGAACATCT GATCAGCGTG ACGCGCGCGT GCACCACCTG CCGGCACTTC GAACCCGCAC CCCGCCACGC CCGACCCGCC CGCCACGCCC AACCCACTGT TCACCGCTGC GCGTTCTTCG ACTACCGCCT CGGACCGTCC GACATCCGGG TCGACTGCCC GGAACACCTC ACCCAGGAGG AGTTCGCCCG CCGCGGCGCC GCGGGCGGCC GGTAA
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Protein sequence | MRVRPPGTPE ERHPGLDAKI VAALDRIGEA LQVLARRLAE AHDLSPTQLR VLARIYAGPP PPARTSALAR ELDVADPTVS DAVAALRRKG LVGRQQDPAD RRHYRLHLTA DGQRTAHAVS RWTAPVEVAT SRIPRPDGEH LLATLLDLLE CLHAEHLISV TRACTTCRHF EPAPRHARPA RHAQPTVHRC AFFDYRLGPS DIRVDCPEHL TQEEFARRGA AGGR
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