Gene Francci3_0210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0210 
Symbol 
ID3905377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp248256 
End bp248930 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content74% 
IMG OID637877539 
ProductMarR family transcriptional regulator 
Protein accessionYP_479328 
Protein GI86738928 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.133838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGTGA GACCGCCCGG CACCCCCGAG GAACGCCACC CCGGACTCGA CGCGAAGATC 
GTGGCCGCCC TCGACCGGAT CGGCGAGGCC CTGCAGGTGC TCGCCCGCCG CCTGGCCGAG
GCGCACGACC TGTCCCCCAC CCAGCTTCGG GTCCTCGCCC GCATCTATGC GGGACCACCC
CCGCCGGCCC GAACCAGCGC GCTGGCACGT GAACTCGACG TGGCCGACCC CACCGTCAGC
GACGCCGTGG CGGCCCTGCG CCGCAAAGGG CTCGTAGGCC GCCAGCAGGA CCCCGCCGAC
CGGCGTCACT ACCGGCTACA CCTCACCGCC GACGGCCAAC GGACCGCGCA CGCGGTCTCC
CGGTGGACCG CCCCGGTCGA GGTAGCGACC TCCAGGATCC CCCGCCCGGA CGGCGAGCAC
CTGCTCGCAA CCCTCCTGGA CCTGCTGGAA TGCCTGCACG CCGAACATCT GATCAGCGTG
ACGCGCGCGT GCACCACCTG CCGGCACTTC GAACCCGCAC CCCGCCACGC CCGACCCGCC
CGCCACGCCC AACCCACTGT TCACCGCTGC GCGTTCTTCG ACTACCGCCT CGGACCGTCC
GACATCCGGG TCGACTGCCC GGAACACCTC ACCCAGGAGG AGTTCGCCCG CCGCGGCGCC
GCGGGCGGCC GGTAA
 
Protein sequence
MRVRPPGTPE ERHPGLDAKI VAALDRIGEA LQVLARRLAE AHDLSPTQLR VLARIYAGPP 
PPARTSALAR ELDVADPTVS DAVAALRRKG LVGRQQDPAD RRHYRLHLTA DGQRTAHAVS
RWTAPVEVAT SRIPRPDGEH LLATLLDLLE CLHAEHLISV TRACTTCRHF EPAPRHARPA
RHAQPTVHRC AFFDYRLGPS DIRVDCPEHL TQEEFARRGA AGGR