Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0199 |
Symbol | |
ID | 3903226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 237273 |
End bp | 238148 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637877529 |
Product | ABC transporter related |
Protein accession | YP_479318 |
Protein GI | 86738918 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.500002 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.26855 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGAGG TGGTCGGGAC AACGGAAAAC GAACTGGCCT GGACGCCGGA GGAACCGGCA GGACAAGAGC AGACAGGACA AGAGCAGGCA GGGCAAGAGC AGGCAGGGCA AGAGCAGGCA AGGTCGGGAG GGACGGCGGG TCCGGCGACG CCGCTCCCGC CGTATTCGGA CAACGACACC CTCGTCGTCA ACGCCCCTGT CATCGAGCTG GACCAGGTGA CCAAGTCCTA CCGGGCGGGA TCGCTGGACG TCACGGCGCT GCGTGGTGTC TCGGCCCGGA TCGGAACCGG CGAGTACGTC GCGATCGTCG GGCCGTCCGG GTCCGGGAAG TCGACGCTGA TGCACATCAT CGGCTGCCTC GACGTGCTCA CCTCGGGCAG CTACCGGCTC TCTGGGGAGG ACGTCGGCGG GATGAGCGAG GCCGACCTGG CCGAGATCCG CAACCGCCGG ATCGGCTTCG TGTTCCAGCA GTTCAACCTG TTGCCGTCGC TGTCCGCGTG GCGCAACGTC GAGCTGCCCC TGACCTACCG GGGGATGCGC CGCGAGGTCC GCCGGGCGCG GGCCGTCGCG GCACTCGACC GGGTCGGCCT CGCCGACCGG GTTGAGCACC GGCCGGGCGA GCTGTCCGGC GGCCAGCAGC AACGCGTCGC GATGGCCCGG GCGCTGGTCG GCGACCCGTC GCTCATCCTG GCCGACGAGC CGACCGGAAA CCTGGACTCC ACCGCCACCG GTGACGTGCT GGACCTCCTC GACGAGCTGC ACCAGCAGGG CCGGACGATC GTCCTGATCA CTCATGAGCT GGACGTGGCG GCCCGGGCGC ACCGGGTCGT GCGGATCCGG GACGGCCTGG TCGAGTCCGA CACGGCGGCA TCCTGA
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Protein sequence | MAEVVGTTEN ELAWTPEEPA GQEQTGQEQA GQEQAGQEQA RSGGTAGPAT PLPPYSDNDT LVVNAPVIEL DQVTKSYRAG SLDVTALRGV SARIGTGEYV AIVGPSGSGK STLMHIIGCL DVLTSGSYRL SGEDVGGMSE ADLAEIRNRR IGFVFQQFNL LPSLSAWRNV ELPLTYRGMR REVRRARAVA ALDRVGLADR VEHRPGELSG GQQQRVAMAR ALVGDPSLIL ADEPTGNLDS TATGDVLDLL DELHQQGRTI VLITHELDVA ARAHRVVRIR DGLVESDTAA S
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