| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0198 |
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| Symbol | |
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| ID | 3903225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 236038 |
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| End bp | 237273 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637877528 |
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| Product | hypothetical protein |
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| Protein accession | YP_479317 |
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| Protein GI | 86738917 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.146044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.294126 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTGGC TGGAGACGCT GCGCACCGGG TGGGACGCGA TCCGCACGCA CCGGCTGCGC
TCCGGGCTGA CTGTGCTGGG CATCCTGATC GGGATCGCCG CGGTGGTGCT CACCGTGGGC
CTCGGCGTCG GCACGCAGAA CAAGGTCGGA TCGCAGATCA GTGCCCTGGG CAGCAACCTG
CTCATCGTCT CGCCAGGCAG CTCGACGAGC CCCACCACCG GCCTGCGCGG CGGGTTCGGC
TCCGCCTCGA CGCTGACCAT GACGGACGCG GCCGCATTGT CGTCACCGGT CTCCACACCG
GACATCGTCG GGGTCGCCCC GGTCAAGCAG GGCCAACTGA CGCTGGTGAA CGGGGCCACG
AACTGGACGA CGACGGTGGT CGGCACGACT GCGGCCTGGC GCCCGGTGCG CAACCGCACC
CTCGCCGAGG GCCGTTTCCT CACCACCACG GACGACGCCC AGTCGGCGGC GGTGACCGTC
CTCGCCTCGG ACACCGCCGA GCAGTTGTTC GGCCGACGCG ACCCGGTCGA CCAGAGCGTG
ACGATCAACA ACATTCCGTT CACGGTGGTC GGGGTGCTCG ATCCGGCCGG TTCGAACACC
ACGAGCAACC TCGACGACCA GGCGGTCGTG CCGCTGTCCA CCGCGGCGAG CCGACTGTTC
GGCGGGACGA CCCGCACCTC GGTCTCCTCG ATCTACATCG AGGCACGTTC GTCGTCCACG
CTCTCAGCGG CCTATCAGGA GGCGACCGAC CTGCTGCTGA ACCAGCACGG CATCGCCAAC
CCGGCCAGCG CCGACTTCAC GATCATCAGC CAGCAGTCGC TGCTGGACAC CGCGACCTCG
GTGAGCAAGA CCCTCACCGT GCTGCTGGCC GGCATCGCGG CACTGTCCCT GCTGGTCGGC
GGGATCGGCG TGATGAACAT CATGCTGGTC TCGGTGACCG AGCGCACCCG CGAGATCGGG
CTGCGCAAGG CGTTGGGCGC ACCACCGGCG GCGATCCGAC GCCAGTTCCT GGCCGAGGCG
TCCGTGCTCA GCTTCGCCGG CGGGGTGGTC GGCGCGCTGT TGGGCATCAC CGGCGCCCTG
GTGCTGCCGC ACTTCATCGA CAACCCGGTG GCGATCGTGT GGTGGGCGGT GCTCGGCGCG
ATCGCCGTGG CCGTCGCCAT CGGTATCGCC TTCGGCGTCT ACCCCGCTAG CCGGGCCGCC
CGGCTGGCTC CCATCGACGC ACTCCGCAGC GAGTAG
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| Protein sequence | MGWLETLRTG WDAIRTHRLR SGLTVLGILI GIAAVVLTVG LGVGTQNKVG SQISALGSNL
LIVSPGSSTS PTTGLRGGFG SASTLTMTDA AALSSPVSTP DIVGVAPVKQ GQLTLVNGAT
NWTTTVVGTT AAWRPVRNRT LAEGRFLTTT DDAQSAAVTV LASDTAEQLF GRRDPVDQSV
TINNIPFTVV GVLDPAGSNT TSNLDDQAVV PLSTAASRLF GGTTRTSVSS IYIEARSSST
LSAAYQEATD LLLNQHGIAN PASADFTIIS QQSLLDTATS VSKTLTVLLA GIAALSLLVG
GIGVMNIMLV SVTERTREIG LRKALGAPPA AIRRQFLAEA SVLSFAGGVV GALLGITGAL
VLPHFIDNPV AIVWWAVLGA IAVAVAIGIA FGVYPASRAA RLAPIDALRS E
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