Gene Francci3_0184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0184 
Symbol 
ID3903153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand- 
Start bp215799 
End bp216353 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content69% 
IMG OID637877516 
Producthypothetical protein 
Protein accessionYP_479305 
Protein GI86738905 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.974158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.4191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCACTA CGATTGACCT ACCTGACGAT CTTCATCGGC AGGCGATGTC GATCGCGCGA 
GACACATCGC GGACCTTGAG CGAGACCGCC GCCGATCTCA TGCGCCGCGG GCTGGGGCAG 
GGCCGGCCCA CCCATGCCTA CCTGCCCTTC GATCTGACCG TTCCCCCGGA CACGCCACCG 
CGCGAGGTGC TCCAGGTCAT CACCGCGTGC GGTGGACTGC TCAGCAGCGC GCTGGCCACC 
GCCGACCCCG CAACGCAGGC CTGGCATTGG GGGCCATGCG ATCCCGAAGG CTTCGCGGCG 
ATGGGCGTCG CCGAAATCCT CCTCCATACC TGGGACATCG CCGCGGGGCT GACGGTCCCC 
TGCCGGTTCC CAGCACCCCT GGGCATACGG GTGCTTCGCC GTCTGTTCCC CGATGCACCG 
GACGGAGACC CGGCTCAGGT GCTGCTGTGG TGCACCGGCC GGAGTGAGCT CGACGGCCGG 
CCTCGACGCA CTTCTTGGAG GTGGGAGGCG ACCACCAGCG CACGGCCGTT CCAGCAGCCC 
GCTCCACAGG TCTGA
 
Protein sequence
MRTTIDLPDD LHRQAMSIAR DTSRTLSETA ADLMRRGLGQ GRPTHAYLPF DLTVPPDTPP 
REVLQVITAC GGLLSSALAT ADPATQAWHW GPCDPEGFAA MGVAEILLHT WDIAAGLTVP 
CRFPAPLGIR VLRRLFPDAP DGDPAQVLLW CTGRSELDGR PRRTSWRWEA TTSARPFQQP 
APQV