| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0178 |
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| Symbol | |
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| ID | 3903147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 209118 |
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| End bp | 210755 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637877510 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_479299 |
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| Protein GI | 86738899 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.760917 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTCTGA GCGCCGCGCC CGATCTGTCC TTCTCCGACA TGCAATCGAC CGTCGCCGTC
CTGACGATCC TGGGCGGTGC GGTCCTGCTG GCCCTGGCCG TCTCCGTATT GCTGCACCGC
ATGGCCAGAC GGATCGGCCG CCATTCGGAG ATCGTCGCCG ATCTCGCACA GCGCGGTAAG
CGGCCGACGC GACTCACGCT CGTGCTGGTG GCCCTGCTCG TCGGCCTCAC CTCCACGGCT
GAACAGACCT GGACCGGGGC AGCCCTGCGA GTGTCTAATG TCGCCCTTAT CGCTGGAATC
GCCTGGTGCG TCACGGTGCT CGCGTTCGCC TTCGAGGACC TCGCGCTCGC CCGCTACCGA
ATGGATATCG TCGACAACCG GCATGCCCGC CGGGTGCGCA CCCAGGTCAC CCTGCTCCGA
CGGATCACGG TGGCCATCAT CTCGATCATC GCGGGCGCCT CGATGCTCAT GACGTTCCCG
AGCGTCCGCG TCGCCGGCGC CAGCATCTTC GCCTCGGCCG GCGTGGTCGG CATCGTCGCG
GGGTTGGCCG CCCAGACCTC ACTGTCCAAC GTCTTCGCCG GACTCCAACT GGCCTTCACC
GACGCCATCC GGGTCGACGA TGTGGTGGTG GTCGAGAAGG AGTGGGGCAG GATCGAGGAG
ATCACTCTCA CCTACGTCGT CGTCCACATC TGGGATGACC GGCGGATGGT CCTTCCGTCG
ACCTACTTCA CCACGACACC GTTCCAGAAC TGGACCCGCA AGGAGTCCGC GGTCCTCGGT
GCCGTCGAGC TGGACCTGGA CTGGGCAATC CCGATCGACG AGATGCGGGC CGAGATGCAC
CGGGTCCTGG ACGCCACGGA CCTGTGGGAC AAGCGAGTCT GCGTCCTGCA GGTCACCGAC
GCCATCGATG ATCACATCCG CATCCGCGTC CTGGTCAGCG GCAAGGACGG ACCGACCGTG
TTCGACCTGC GCTGCCACAT GCGCGAGGCA CTCGTCCGAT GGGTCCAGCA CAACCATCCG
ACAGCTCTGC CCCGGACCCG CATCGAGTTC GACGCCTCCG CGCACCTGCT CGGTCTGCGC
ATCCCGGATC AGGGCCGGGC CGATGACCGC GACGGCCGCC ACCCCGATCC GTCCGGCAAC
GGCCGGCACA ACTATCTCCA CGGCCGCGAC CATCCCCACG GCGACCATCC CGATGGAGAC
CATCCCGACG GCAGGTCCGA CCGGCTCCGC AAGACGAACG GCATCCGCCG CGGCGAAGAA
CCAGCGCGGG CGGTTCCCGT CCCAGTGCAA GGTCTCCTCT CCCCCACGAT CATGGATGCC
ACGAACTCGG CCGCGGTTAC CGCCGCCGGC AGCGCGAGCC GGGAGGCGGA GACCGGTACG
GACGGCGGGA CGAGCACCGC GCCCACGGGT GCGCCTGCCG ACGCCGCCGA GGACGCCCGG
CTGTTCTCCG GCGCGAGTGC CGACGCCGCG GAACGGGCGC GGAACTTCAG CGAGACCAGC
GAGACCAGCG AGCATGACAG CTCCGCTTCT TCTCCACCGC CCCGCGACGA CGACGACGAT
GACGACGCGG CGCAGCCAGG GGAATCGACC CGACGCCAAA CGACACCGCA GGCGCCAAAC
GACACCACAG GCGCATAA
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| Protein sequence | MRLSAAPDLS FSDMQSTVAV LTILGGAVLL ALAVSVLLHR MARRIGRHSE IVADLAQRGK
RPTRLTLVLV ALLVGLTSTA EQTWTGAALR VSNVALIAGI AWCVTVLAFA FEDLALARYR
MDIVDNRHAR RVRTQVTLLR RITVAIISII AGASMLMTFP SVRVAGASIF ASAGVVGIVA
GLAAQTSLSN VFAGLQLAFT DAIRVDDVVV VEKEWGRIEE ITLTYVVVHI WDDRRMVLPS
TYFTTTPFQN WTRKESAVLG AVELDLDWAI PIDEMRAEMH RVLDATDLWD KRVCVLQVTD
AIDDHIRIRV LVSGKDGPTV FDLRCHMREA LVRWVQHNHP TALPRTRIEF DASAHLLGLR
IPDQGRADDR DGRHPDPSGN GRHNYLHGRD HPHGDHPDGD HPDGRSDRLR KTNGIRRGEE
PARAVPVPVQ GLLSPTIMDA TNSAAVTAAG SASREAETGT DGGTSTAPTG APADAAEDAR
LFSGASADAA ERARNFSETS ETSEHDSSAS SPPPRDDDDD DDAAQPGEST RRQTTPQAPN
DTTGA
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