Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0163 |
Symbol | |
ID | 3903094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 192225 |
End bp | 193595 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637877495 |
Product | hypothetical protein |
Protein accession | YP_479284 |
Protein GI | 86738884 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCAACCA GGGCGAAATC GCATCAACCC CGGCCCGGGA AGCGGCCCCG GCCGTACGGC CCGATCCTGC TGGCCGGCCT GGTGGTCCTT GTCGTCGCCC TGCTGGCGGG CTGGGCCCTC CGTGACCCGG GCAACCAGGC TGCGAACGCT GGAGCCCTCC CGCAACCGCC TGCGTCCCCG GGCGCGTCCC CGGGCGCGTC CCCGGGCGCG TCCCCGGCCG CGTCCCCGGC CAGGGCGGGA GCAAGCCCCA CCGCCGCCGT TGCTGGTGGT ACCACCGTTG CTGGTGCTAC CACCACTGCT GTGGATGTGT ACGCCCACGC CCATGCCGGG ATGCTGAGCC CGGTCGTGCG CGACGATCCG CAGCTCGTCT ATGTCCCGAA CCTGTCCGAC GGCACGGTCA GCGTCATCGA CCAGCACACG CTGCGGGTAG TGGCCACCTA CCCCACGGGG CGCGGCCCGC AGCATGTGGT CCCGTCCTGG GACCTGCGGA CACTGTGGGT CAACAACAAC GTCGGGAACA GTCTGTCACC GATCGACCCG CGGACCGGGC GCCTCGCCGG CCGGGCCATA CCGGTCACCG ACCCTTACAA CCTGTACTTC ACCCTCGACG GAAAGAGCGC GATGGTCATC GCCGAGGCGA ACCACAGCGT CGACTTCCGC GACCCGCACA CCTTCGCCCT GCGCCACAGC CTCGACGTGG GCAGCCGGTG CGCGGGCGTC AACCACGTCG ACTTCTCCCC GGACGGCACC TATGCGATCG CCACCTGCGA GTTCGCCGGC CAACTGGTCA AGATCGACCT GGCGCACGAG CGGGTCCTCG GCTACCTCGA TCTCGGACGC ACCGCGGCCC CCCAGGACAT CAAGATCGAT CCTGCGGGCC GGGTCTGGTA CGTCGCCGAC ATGAACGCCG GCGGCGTCCA CCTCATCGAC GGGGACACCC TCACCAAAAC CGGCTTTGTC CAGACCGGCC CGGAGGCCCA CGGCCTGTAC CCCAGCCGCG ACGGCCGCTA TCTCTACGTC GTCAACCGGG GCGGCATGAT GACCTCCGAC ATGGTCCCGT TCCCGCATAC CGGTGATCGG GGCTCCGTGT CGGTCATCTC CTTCACCACC AGGAAGATCG TCGCAAACTG GGCCATCCCC AGCGGCGGGA CCCCCGATAT GGGCAACGTC AACGCCGACG GGACCCGGCT GTGGCTGTCC GGCCGGCGCA GCAACGTCGT GTACGTGTTC GATACCGGCG GGAACGGCGG GTCGGACCCG ACGACCGGCC GGCTGTTGAC CGAGATCCCG GTGGGCCACG AGCCGCACGG GCTCGCTGTC TGGCCGCAGC CCGGGCGCTA CTCCCTCGGC CACACCGGAA TCATGCGATA A
|
Protein sequence | MPTRAKSHQP RPGKRPRPYG PILLAGLVVL VVALLAGWAL RDPGNQAANA GALPQPPASP GASPGASPGA SPAASPARAG ASPTAAVAGG TTVAGATTTA VDVYAHAHAG MLSPVVRDDP QLVYVPNLSD GTVSVIDQHT LRVVATYPTG RGPQHVVPSW DLRTLWVNNN VGNSLSPIDP RTGRLAGRAI PVTDPYNLYF TLDGKSAMVI AEANHSVDFR DPHTFALRHS LDVGSRCAGV NHVDFSPDGT YAIATCEFAG QLVKIDLAHE RVLGYLDLGR TAAPQDIKID PAGRVWYVAD MNAGGVHLID GDTLTKTGFV QTGPEAHGLY PSRDGRYLYV VNRGGMMTSD MVPFPHTGDR GSVSVISFTT RKIVANWAIP SGGTPDMGNV NADGTRLWLS GRRSNVVYVF DTGGNGGSDP TTGRLLTEIP VGHEPHGLAV WPQPGRYSLG HTGIMR
|
| |