Gene Francci3_0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0162 
Symbol 
ID3903093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp191494 
End bp191853 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content65% 
IMG OID637877494 
ProductMerR family transcriptional regulator 
Protein accessionYP_479283 
Protein GI86738883 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCG GCGAACTGGC GGAACGGGCC GGCACGAGCA CCCGCACGCT GCGCTACTAC 
GAGTCACACG GGTTGGTACG GCCACGGCGC TCCGCCAACG GCTACCGCGT CTACGACGAG
ACAGAGCTGC GAGTCGTCCA CGAAATTCGG GCCCTGCTCG CTGTGGGCTT CGACCTCAAC
GACATCCGCC CGTTCGTCGC CTGTTTGCGG GCCGGCAACA CGTCGGGACA CGTTTGCCCG
GACTCTGTGC TGGTGCTGCG ACGCAAACTC GCCGAAGTCG ATGTCTGTAT CAAGCGGCTC
GACGCGGTAC GGCAGCAGTT GCAGAGCCAG CTCGCTCAAA CGATCGCGAT GCGGCCGTAG
 
Protein sequence
MLIGELAERA GTSTRTLRYY ESHGLVRPRR SANGYRVYDE TELRVVHEIR ALLAVGFDLN 
DIRPFVACLR AGNTSGHVCP DSVLVLRRKL AEVDVCIKRL DAVRQQLQSQ LAQTIAMRP