Gene Francci3_0156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0156 
Symbol 
ID3903087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp183259 
End bp184350 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content64% 
IMG OID637877489 
Producthypothetical protein 
Protein accessionYP_479278 
Protein GI86738878 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGCAA CGATTTTTTT GCCCGCGGCC ACGTCTCCCG CGGCCACGTC TCCCGCCGCC 
ACACCCCCAC CGCACCGTCG TCGCGTTCAA CCGCCCGCCG GGCGGGCCGC TGGCACGACC
AGCCCCGCCG CCGCAGCCGC TCACATCGCA GAGCTGGGCA GGAACCTGCT ACTCAACGTC
TTGGGCCTCC CTGCCTTCAC CGTGGCCGCG CTGGAGGTAG TACCGAAGCA GTCGATCTTT
CAGCCGGGAT CGCTGGCGAT CGCTGGTAGG GCGCCGGATT GGGAGCAATA CAAGCCCCCG
GCTCCTGGTC GGGCCAGCCG GCTGGTGGGC GGGTCGGGTC GATACCAGCG GGAGTTCGAC
GCGGCCCGAA GCACGTGGGA AGCCGACACG GCCGAGTTCC AGCGGGTCGA GACCGACCGG
CTACGACAAC TCACTGCGGC TCGAACCAGA CACGACCAGC AGGTGGCTGC GGCCCTCGAC
CGTGCCGCGG CGCACAACGC CCGCATCGCG GCACAGTGGG CGGCGTGTCT GGACGGTGAC
CCGGAAGCGG TCGAGTGGTT CGTCGGCCAA GCGCTCGCGG CCACGTCCTA TCCCGACGGC
TTCCCCGTAG CACGCAAAAT CGCCTACCGG CCCCAGGAAC ACGACATCGT CATCGAGATC
GAATTCCCAC AACGATCCGT GATCCCCGAA ATCAGGGAAT ACAAGCTATT CAAGACCGCA
CCCGAGGTCA GGCCGGTAAA GTGGAAAGAG CCTGAAGCCA AGAAGCTATA TGCGCAGCTC
GTTGCCTGGA TGACGTTGCG GATAGTGCAC GAAGTCTTCG AGGCCACGAA GACGCTTGAC
CTCATCGATG TTGTTGTCTT CAACGGAACC GTCATCGATG TAGCACCCAC GACCAGCAAA
GACACTCTCT ACCATCTGGT AAGTCTCGAA CCCGAACGAT CCCTGTTCGA GGCGAGCCTT
GAACTCGACC GAGTCACCGA TCCGATCGGA TGCCTGCCCG AGCTGGGCGC GGAAGTCTCA
CCCAACCCTT ACGATCTAGA AGCCGTGAAA CCCGTTGTCA CGTTCGACCT CCGTCGATTC
AGACGTACGT AG
 
Protein sequence
MAATIFLPAA TSPAATSPAA TPPPHRRRVQ PPAGRAAGTT SPAAAAAHIA ELGRNLLLNV 
LGLPAFTVAA LEVVPKQSIF QPGSLAIAGR APDWEQYKPP APGRASRLVG GSGRYQREFD
AARSTWEADT AEFQRVETDR LRQLTAARTR HDQQVAAALD RAAAHNARIA AQWAACLDGD
PEAVEWFVGQ ALAATSYPDG FPVARKIAYR PQEHDIVIEI EFPQRSVIPE IREYKLFKTA
PEVRPVKWKE PEAKKLYAQL VAWMTLRIVH EVFEATKTLD LIDVVVFNGT VIDVAPTTSK
DTLYHLVSLE PERSLFEASL ELDRVTDPIG CLPELGAEVS PNPYDLEAVK PVVTFDLRRF
RRT