Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0151 |
Symbol | |
ID | 3903082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 179235 |
End bp | 179987 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637877485 |
Product | transposase, IS4 |
Protein accession | YP_479274 |
Protein GI | 86738874 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTACGTA CACACCGGTA TCCATCGGAT CTGACCGACG CCGAGTGGGC GCTTGTCGAA GCTGTGTTGC CGCCGGTATC GAAGGACGGC CGGCCCGGGG CGCACTCTCG CCGGGACATC GTGGACGCCA TCCTGTACGT GACACACAAC GGGATCGTGT GGCGCGCGCT GCCGGCGGGC TTCCCGCCGT GGCAGACGGT CTACGGCTTC TTTGACCGGT GGAAGAAAAA AGGCGTGACC GCCGGGATCC ATGACGCGCT GCGGGGCAGA GTCCGGCTCG CGCGGGGCCG GGAGGCGGAG CCGACCGCGG GGGTGGTGGA CTCCCAGTCG GTCAAGGGCG CCCAGACGGT CGGCGCCGAC TCCGGCGGCT ACGATGCCGG CGAGAAGGTC AACGGCCGCA AGCGGTTCGT GATCGTCGAC ACGCTGGGTC TCCTGCTGAC CGTCCTCGTC GTCCCTGCCA ACGTCCAGGA CCGCGACGGC GGCCGGCGCC TCCTGATAGA CCACTACTTC ACCCATCATC GCTGCCGTCA TCTGTTCGCC GACGGCGGTT TCGCTGGCCA GCCTGTTGCA TGGGCGCGGA CCATCATGAG GACCACCGTC GAGATCGTTC GGAAGAAACC CGGTCAGAAA ACCTTCGAGG CCCTGCCGAA ACGATGGGTG GTCGAACGTA CCCTTGTCTG GCTCACCGCC CACCGGCGGC TTGCCCACGA CTACGAACGC CACCCCGCCA CCTCCGCATC GTTCATCCAC TGA
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Protein sequence | MVRTHRYPSD LTDAEWALVE AVLPPVSKDG RPGAHSRRDI VDAILYVTHN GIVWRALPAG FPPWQTVYGF FDRWKKKGVT AGIHDALRGR VRLARGREAE PTAGVVDSQS VKGAQTVGAD SGGYDAGEKV NGRKRFVIVD TLGLLLTVLV VPANVQDRDG GRRLLIDHYF THHRCRHLFA DGGFAGQPVA WARTIMRTTV EIVRKKPGQK TFEALPKRWV VERTLVWLTA HRRLAHDYER HPATSASFIH
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